Rhincodon typus (whale shark): 109928073
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Entry
109928073 CDS
T06055
Symbol
afg1lb
Name
(RefSeq) lactation elevated protein 1 homolog B isoform X1
KO
K18798
peroxisome-assembly ATPase [EC:
3.6.4.7
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rtp03029
]
109928073 (afg1lb)
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.7 peroxisome-assembly ATPase
109928073 (afg1lb)
Mitochondrial biogenesis [BR:
rtp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
109928073 (afg1lb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFG1_ATPase
AAA_16
AAA
AAA_22
UvrD-helicase
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
109928073
NCBI-ProteinID:
XP_020383665
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Position
5:complement(22172796..22316625)
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AA seq
478 aa
AA seq
DB search
MAASRTPLVPFGRLSNFLNAERRGVKRTLWLANRVSFKGYALPATNSAAPDTGFQLKGSA
FASNVEGPLEHYELLVRQGDLKDDDHQRKVVQCLQKLHEALKGYNPGQQNFFSKFFERSI
PPKGLYVYGDVGTGKTMVMDLFYSHAAVKRKNRVHFHGFMLDVHRRIHRLKQTLPKRKPG
LMAKSYDPIAPIAAEISDESCLLCFDEFQVTDIADAMILKQLFENLFQNGVVVVATSNRP
PEDLYKNGLQRANFVPFIAVLKKYCEAIQLNSEVDYRKRQLPGAGKLYYLTSEADVEAVV
DKLFDELAQKQNDITRPRILKVQGRELRLSKACGTIADCTFEELCDKPLGASDYLEMTKH
FDTVFIRNIPTLTLAKKTQARRFITLIDAFYDHKVRVICSAAMPLERIFVQKDHDSHEDD
ARVFIDDLGLEQTKLEDLSIFSGAEEIFAFQRTVSRLTEMQTEQYWNDGDRGKKDSAE
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccaggacgcccttggttccgttcggtcgtttgagcaactttttaaacgct
gaaagacgcggggtgaagcgcacgctatggctggcaaaccgggtgtccttcaaaggttat
gctcttccagcaacaaacagtgctgcacctgatacaggatttcagttgaaaggttctgcc
tttgcatcaaatgttgaaggacctttggagcactatgaattattggtcagacaaggtgac
ctaaaggatgatgaccaccagagaaaggttgtacagtgtttgcagaagcttcatgaagca
cttaaaggatacaatcctggtcagcaaaatttcttctcaaagttttttgaaagatctata
cctccaaaaggcctttatgtatatggagatgttgggacaggcaagaccatggtgatggac
ctgttttattctcatgcagctgttaaaaggaaaaatcgagtacattttcatggtttcatg
ctggacgtccatcgaagaattcatcggttaaagcagactttgccaaaaagaaaacctggc
ttaatggccaaatcctatgatccaatagcacctatcgccgcagaaatcagcgatgagagc
tgcctgttatgttttgatgagtttcaggttacagatattgctgatgccatgatactgaag
cagctctttgaaaacctgtttcaaaatggtgttgttgttgttgccacgtctaatagacca
cctgaagacctctataaaaatgggcttcagagggctaactttgtgccattcattgctgtc
ctgaagaaatattgtgaagccatccaactgaattctgaagttgactacaggaaaagacag
cttcctggagcagggaagctttattatctcacaagtgaagctgatgtggaggctgtcgtg
gataagctatttgatgagctggctcagaaacaaaatgatataacacgaccaaggattttg
aaagtgcaaggcagagaactgagactgagcaaagcttgcggaaccatagcagactgcaca
tttgaagagctgtgtgataaaccccttggagcaagtgactacctggaaatgactaaacac
tttgacactgtattcattcggaacataccaacactgactttggcaaagaagactcaagca
cgacgcttcatcactctcatcgatgccttttatgatcacaaggtcagggttatttgctca
gctgcaatgccattggagagaatatttgttcagaaggatcacgacagtcatgaagacgat
gccagagtcttcatagatgacctaggattggaacagactaaactggaagacctttcaata
ttttctggggcagaagaaatatttgcatttcagcgcacagtctcacggctcacagaaatg
cagactgagcagtactggaatgatggagacaggggaaagaaggactctgctgagtga
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