Rhincodon typus (whale shark): 109928122
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Entry
109928122 CDS
T06055
Symbol
nfatc2a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2 isoform X1
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04020
Calcium signaling pathway
rtp04148
Efferocytosis
rtp04218
Cellular senescence
rtp04310
Wnt signaling pathway
rtp04370
VEGF signaling pathway
rtp04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109928122 (nfatc2a)
04370 VEGF signaling pathway
109928122 (nfatc2a)
04020 Calcium signaling pathway
109928122 (nfatc2a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109928122 (nfatc2a)
09143 Cell growth and death
04218 Cellular senescence
109928122 (nfatc2a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
109928122 (nfatc2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109928122 (nfatc2a)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
109928122 (nfatc2a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
109928122
NCBI-ProteinID:
XP_020383713
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All DBs
Position
19:complement(38520586..38661252)
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AA seq
967 aa
AA seq
DB search
MSFIYNEPDQQVDSEEFDFSALFDNSHDEDFATREAENVAASHKGIVHPSGIGYPTIDVS
HYGSQSCSSMASAVLSGERMSEYSQAESRDFKCYLEAVKPPVSSGVESPRIEITPSPGLF
HVIPHAASCGEQTYHSPTTIPRVTLPVPGSESIVYRDPLSPASSGSSTSWHSFVSHESSC
SHYGMSPQTSPLTSPCVSPKNGSEEYQGQGAHHSPRTSPVNSPSTHIENWPGARSPSPTP
RTSSRSSSPCGKRRYSCDRSRTPSPQASPRVIAIEEPNLHQFSNSASLADAMSTLTTDSN
NDLGEVLPIKARIMDLTPPSSLKTDICKDEKLTSFTIANFVEFSGQCQDVKKDIYSIDPL
FLMPPHPIHRTKPKPPCSIPSLPPLEWQLLSSSEPYELKIEIQPKPHHRAHYETEGSRGA
VKAPNGSHPVVQLHGYMENKPLSLHIFIGTADERLLRPHAFYQVHRITGKTVSTTSYEKI
CGNTKVLEIPLLPENNMKAVIDCAGILKLRNADIELRKGETDIGRKNTRVRLVFRVHIPQ
ANGRTVSLQVASNPIECSQRSAHELPMVEKQSTDSCFVTGGQRMILTGQNFTTESKVLFT
EKTHDGQQIWEVEATVDKDKSQPNILFVEIPRYRNQHIRTSAKVNFCVVNGKRKRSQPQK
FTYLPAVPIIKTEPTDECEDTIFCNTVHHRTMSEFYTTQQVMTPVMVANPTSCLGGSLAS
CRTGFSSHDSKYQQQNPTGVVYQRSKGGSPNHLGYQPSAVMVPSIPIIQDAHKSVLVHAG
SPVQSSMTHHSPTNQSSTIIHHSHNNHESSSMIHNSPTNHQSSLIQHSPTHQQLPSMIHH
SPTSQQLRYSSQQDYQRQVYSENDAHVPIVRSTTPQAVHHVQKNSPNQYAAVIQQQQQTS
NAIQKVSKNGASPSQLPLILDQQEKETTVTGVTVKQEPQNLDQAYLDDETTWDFFQRLEH
FNKLMKL
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcatttacaatgaaccagaccagcaggtcgattcagaagaatttgatttttct
gcactttttgataatagccacgatgaagactttgccacaagagaggcagaaaatgttgct
gcttctcataaaggcattgttcatccttctggaattggttatccaaccattgatgtctcc
cattatggatctcagtcatgtagctctatggcatctgcagtattaagtggagaacgtatg
agtgaatacagtcaagcagaaagcagagatttcaaatgctacctagaagctgtaaaaccc
cctgtttcatctggagtagaaagtccaagaattgagatcacaccatcccctggactgttc
catgtaattccacatgcagctagttgtggagagcaaacatatcattctcccactacaatt
cctagagttactttacctgtgccaggctcagaaagtattgtatatagagacccactcagt
cctgccagtagtggctcttccacaagttggcattcctttgtgtctcacgagtccagctgt
tcccattatggcatgtcccctcagacatctccattaacatctccatgtgtctcaccaaag
aatggctcagaagaatatcaaggtcagggtgctcaccattctccacgaacatcacctgtc
aactcaccatccactcacattgaaaactggccgggtgcaaggtcaccgtccccaaccccc
cgaacttcttcaaggtcatcatcaccttgtgggaagaggaggtactcctgtgaccgctca
agaacgccttctccacaagcttcaccaagagttattgcaatcgaagaacccaatttgcac
caattttcaaattctgcaagcctggccgatgccatgagcactctcaccaccgattccaac
aacgacttaggcgaagtacttccgataaaggctcggatcatggatcttactccaccatca
tcccttaaaactgacatatgtaaagatgaaaaacttactagctttaccatagcgaatttt
gtcgagttttcagggcagtgtcaggatgtgaagaaagacatctacagtattgatccgctt
ttcctgatgccccctcatccaatacatcggacaaaacccaaacctccctgcagcatcccg
tctcttcctcctttggagtggcagctgctgagttcatcagaaccatatgaattgaagatt
gagatacagcccaagcctcaccatcgggcacactatgaaacagaaggcagtcgcggcgca
gttaaagctcctaatgggagccaccctgtagtccagctccatggctacatggaaaacaag
cctttaagcctgcacatatttattggaacagcagatgagcggctactaagaccacatgcc
ttctatcaagtccaccgcatcactggcaagacagtctcaaccaccagctatgagaaaatt
tgtggaaataccaaggttttagaaattccgcttcttccagagaacaacatgaaagcagtg
attgactgcgctgggatactgaagctgcgaaatgctgacattgagctgaggaaaggagag
acagacattggcaggaagaacactagagtgaggcttgtttttcgagtacacattcctcaa
gccaatggcaggacagtctcgttacaggttgcttcaaatcccattgaatgctctcagaga
tctgcacatgaattgccaatggtggaaaaacagagcacggacagttgtttcgtaacaggt
ggacaacggatgattctcactggtcaaaactttactaccgagtcaaaggtccttttcaca
gagaagactcatgatggacagcagatatgggaggtagaggcgacagtggataaagataaa
agccaacctaacattctttttgttgaaattccacgctatcggaaccaacatatccgcaca
tcagcaaaagtgaacttctgtgttgttaatggaaaaaggaaaaggagccaaccacagaaa
tttacatatctccctgcagtgcctataattaaaacagagccaacagacgagtgtgaagac
accatattctgcaacaccgtacatcacagaaccatgtctgagttttatactacacaacag
gtcatgacccctgttatggtcgctaatcccacttcctgtcttggcggaagcttggcttcc
tgtcgtactggattttcttcacatgattctaagtatcagcagcagaatccaactggagtt
gtctatcagagatcgaaaggtggcagtcctaatcatcttggctatcaaccgtctgctgtg
atggtgccatccattcccataattcaagatgctcacaaatcagtattggtgcatgctggg
tcacctgtccagtcttctatgacacaccactctccaaccaatcagtcttccaccataatt
catcattcccataacaatcatgagtcttcttccatgatccacaactctccaacaaatcat
caatcgtcactgatccaacactccccaacccatcagcagctaccttctatgattcaccat
tcaccaaccagccaacagttgagatacagcagccagcaggattaccaacgccaggtatat
tcagagaatgatgcccatgtgcccattgtgcggtccactacaccacaagcggtacatcac
gtgcaaaaaaatagcccaaatcaatatgcagccgtgattcagcaacagcagcaaacatcc
aatgcaatccagaaggtttcaaaaaatggtgcttcaccatctcagcttccattgatactg
gatcaacaggaaaaggaaactacagttaccggagtcacagtgaagcaggaaccacagaac
cttgaccaggcatatctggatgatgaaactacatgggacttcttccaaaggctggaacac
tttaataagttaatgaaattataa
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