Rhincodon typus (whale shark): 109928185
Help
Entry
109928185 CDS
T06055
Name
(RefSeq) oocyte zinc finger protein XlCOF19-like
KO
K09191
general transcription factor IIIA
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109928185
03021 Transcription machinery [BR:
rtp03021
]
109928185
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109928185
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
109928185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_15
zf-C2H2_4
zf-C2H2_ZN142
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
109928185
NCBI-ProteinID:
XP_048475343
LinkDB
All DBs
Position
42:complement(8219341..8220971)
Genome browser
AA seq
265 aa
AA seq
DB search
MVMKSLIQTQTIPRERDGVGGEHQRVHTEEKPFVRSKCGKGFTEFSNQLQHQCVHSDKRS
FECPDCRNCCKLSGHLAFHQWLRTEEKPFRCSHCGTGFRRSYDVTVHQQIHTGERLFFCS
KFGKGFTQLSDQLKHLRLHTGERIFKCPDGEKGYKSSAHLSVHQRIHTVERLYTCSECGK
GFTDPSHLTVYQWVHTAERPFTCSECGTGFTQLSDDLSEQNVHTGERPFTCSHCGNGFKQ
SSQLTVHQRVHTGDRPFKWRKKFIG
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggttatgaaaagcctgattcagactcagacaattcccagggagagggatggagttggt
ggtgaacaccagcgagttcacactgaggagaaaccattcgtccgctccaagtgtgggaaa
ggattcactgagttttccaatcagttgcaacaccagtgtgttcactctgacaagagatcc
tttgaatgtccagattgcagaaattgctgtaaactttctgggcacttggcatttcatcaa
tggcttcgcacagaggagaaaccattcaggtgctctcactgtggaactgggttcaggcga
tcgtatgatgtcactgtccaccagcaaatccacactggtgagaggctgttcttctgctct
aagtttgggaagggattcactcaactgtctgatcagctcaaacatctgcgacttcacact
ggggagagaatttttaaatgtccagacggggagaagggctataaaagttctgctcatctc
agtgtccaccagcgaattcacacagtggaaagactgtacacttgctccgagtgtgggaaa
ggattcactgatccatcccaccttactgtataccagtgggttcacacagcggaaagacca
ttcacctgttctgagtgtgggacaggatttactcagttatcagatgacctgtccgagcaa
aatgttcacactggtgagagaccattcacatgctctcactgtggaaatgggttcaagcaa
tcatcccaactcactgtacaccaaagagttcacactggggacagaccattcaagtggagg
aaaaaattcattggttaa
DBGET
integrated database retrieval system
