Rhincodon typus (whale shark): 109928311
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Entry
109928311 CDS
T06055
Symbol
usp24
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtp01002
]
109928311 (usp24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109928311 (usp24)
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109928311 (usp24)
Peptidases and inhibitors [BR:
rtp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109928311 (usp24)
Ubiquitin system [BR:
rtp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109928311 (usp24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
DUF3517
UBA_7
UBA
Motif
Other DBs
NCBI-GeneID:
109928311
NCBI-ProteinID:
XP_048458407
LinkDB
All DBs
Position
10:54337227..54566941
Genome browser
AA seq
2596 aa
AA seq
DB search
MDVEEEHMTTLLCMGFSEPAAIRKALRMAKNDINEAVALLTNESPGLGYEPMESGDRQVG
GGGGGGGGGGGGGGGGGGGTGSRGVGGGDYSRSGFDPPPAYDEVVEVERSNDENGNCSGS
IEFPTTNLYELESRVFTDHWSIPYKREESLGKCLIASTYLARLGLADADENCKRFTDRCM
PEAFKKLLTSSAVHKWGAEIHEGIYNMVMLLVDLVAERVKQDPIPIGLMGVLTMAFNPGN
EYHFKNRMKVCQRNWADVFGDGKTYAISPPVNLQKEPYGWLIDLVNRFGEMGGFSAIQLK
LGAEDIETAAVSALVQPLGACAEYLNPAVVQPMLDPVIDKMIRYVQSLEEKDLKDKKLVN
IPELLSAIKLLCMRFQPELVMVVDDLRLDILLRMLKTPHFSAKMNSLKEVTKLIEDSTLS
KSVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSMDELTKIWR
IQSGQSSTVIENIHTIIAAAAAKFNYDQLNHLFILIQKSWEIESDRIRQKLLSLIGKIGR
EARSENTTGKVLEVLWELAHLPALPTNLVQQALEEHLTILSEAYAVKEQIKRSYIIKCIE
DIKKSSQQNNQHPVWVVPALRQLHEITRSFIKQSCQKQDKSIVQDLKKNFEIVKLVTSSL
VACHRLAVSAAGAGGLTGSTVVDGRYTHQDYLEAHLRFLAFFLQEASLYLGWNRAKEIWE
CLVTGLDICELDREMCFEWFTKGHGDLESDIQQQLFKEKILKLEPYEITMNGFNLFKTFF
EIVNLSDHRLKKQGAQLHVEKLELAGMDFIWRIAMESPDEEIAHEAIHLIINYSYISLNP
RLKKDSVSLHKKFIADCYKRLEVASSALGGPTLTHAVTRATKMLTATAMPTVATSVQSPS
RSSKLIIIERLLLLAERYVITIEDLYSVPRTILPHGASFHGHPVTISVICESTKETFSIE
AHSNETIGSVRWKIISHVNCPLDNLQIFANDSLLTMNKDQKLLHQLGFSDDQILTIKTPV
MGTASGSSVDSSASSGVFNSAYVMEQEKSLPGVVMALVCNVFDMLYQLANLEEPRITVRV
RKLLLLVPTDPAIQEALDTLDALGRKQKTLLTDSSHQTSKSPSLSSKQQHQPSANTILES
LFRSSAPGMSTFRVLYNLEVLSSKLMPTSDDEMARNCAKSFCENFLKAGGLSLVVNVMQR
DSIPSEVDYETRQGVYSICLQLARFLLVGQTMPSTLDDDFLKDGMEALSSRPFRNVSRQS
SRQLSMCGSQEKSTMRQMSVTSDRSSIRIEEIIPAARVAIQTMDVNDFTSTVACFMRLTW
AAAAGRLDLVGSCQPIRESTNSLFSVGIRNRLSSSGSTCSSGSEGESTTLHAGICVKQHS
VSTKDTLIAREALSLLVTCLQLRCQQLGSFYVLPCVSDFIIDILLGSPSAEIRRVAWDQL
YTLSQTDTSTNPEIQKPNQFLLHVILTTQLPLWSPTSIMRGVNQRLLSQCTEYFGLRCQL
LDDLTSSEMEQLQISPAAMLEDEVNWLDNFEPTWTAESETSESDNVLLAGHLRLIKTLLS
LSGPEKELLGPSLIKQLMEDFLFRASKIILTSSSPAGSCSVSQQDFHPKCSTVNSRLAAY
EVLVMLADSSLSNLQLISNELLSMHHQFDPALTKEFEYLPPVDSRSVSGFVGLKNGGATC
YMNAVFQQLYMQPGLPEAMLSVDDDDDENPEENVFYQVQSLFGHLMESKLQYYVPETFWK
IFKLWNKELYVREQQDAYEFFTSLIDQLDEHLKKLGREQFFKNTFQGIFSDQKICKDCPH
RYEREEAFMALNLGVTSCQSLEISLDQFVRGEVLEGGNAYYCEKCKEKRTTVKRMCIKSL
PSVLVIHLMRFGFDWESGRSIKYDEQIRFPWLLNMEPYTVSGMARQEHSSEHGENGKAGD
HLGGGSPRKKGAPTENYELVGVIVHSGQAHAGHYYSFIKDRRTGGKGKWYKFNDTVVEEF
DLNDETLEFECFGGEYRPKVYDQSNPYPEVRRRYWNAYMLFYQRMLDQNSPVLPKKSRVS
VVRQEAEDLSLSAPSSPEVSPQSSPRPHRSNNDRLSLLTKLVKKGEKKGLFVEKLPARIY
QMVRDENLKFMKNRDIFNSDYFNFMLSLISLNATKLKHPMYQTMAKVSMKLAIQFLFQTY
LRTKKKLRVDTGEWITLIERLLSNSCEACQWLIEFLIGCEGRELIKIFLLECSVREVRIT
VATILEKTLESALLYQEKLRGLDQLLDVLLSLLDKDVAENCKNCSQYFILFNNFVQKGFK
ACQLLFKHSAFKHMLCFLLGPSRQNNQNRRWSSAQAREFWYLHITLASLVLHTDISSLMT
VDPGPYKWHTPSPQVPLHQDVETLFRPEGQAYLLEVMYAMRELTGSLSVISDMVTYCCFC
NEHFSLVQVLQIIKSQLETAPPHELKNIFQLLHEILVIEDPLQSRRLKFAFESEKGLLAL
MHQSNNVDSSRCYQCIKFLVLLAQKCAAAKDYFREHPHHWSWAVQWLQKKMSEHYWAPQS
NISNETSTAKTFQRTISAQDTLAYATALLNEKEQSGSSNGSDGSPATENGDRTLRQGSES
PMMLGDSKSDLDEMDP
NT seq
7791 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggaggaagagcacatgacgacgctgctgtgcatgggcttctcggagcccgcc
gccattcgcaaggcgctccgcatggccaagaacgacatcaacgaggccgtggccctcctt
accaacgagagccctggtctcggctacgagcccatggagagtggcgatcgccaggtcgga
ggaggaggaggaggaggaggaggcggcggtggtggcggcggcggcggcggcggcggcact
gggtcccgcggtgtgggtggaggggattacagccggagtggattcgaccctccacccgcg
tacgacgaggtggtggaggtggagaggagcaatgatgagaatggaaactgctcaggaagc
attgaatttcccaccacaaatctttatgaattggaaagtcgtgtgtttacagatcactgg
tccatcccttataaacgtgaagaatcactgggcaagtgcctgatagcatccacataccta
gcacggctaggtcttgcggatgctgatgaaaattgcaaacgctttacggatcgatgtatg
ccagaagcatttaaaaagttgttaacatcaagtgctgtccataaatggggtgctgaaatc
catgagggaatctacaacatggtgatgcttctagttgatctggttgcagagcgagtcaaa
caggacccaattcccattggccttatgggagtactcaccatggctttcaatccaggaaat
gagtaccatttcaagaaccgaatgaaagtgtgccaaaggaattgggcagatgtttttggg
gatggcaaaacgtatgccatctctccaccagtcaatctacagaaggaaccttatggatgg
ctcatagatctggttaatcggtttggagagatgggtgggttttcagccatccagctgaag
cttggtgcagaagatatagaaaccgcggctgtgtctgcactggtacagcctctaggagca
tgtgctgaatatctaaatcctgctgtagtacagcccatgctggatccagtcattgacaag
atgattcgatatgtgcaaagtttagaagaaaaagatctgaaagacaagaaactggtgaac
attccagaacttctatctgccatcaaattattatgcatgcgatttcagccagagttggta
atggtggtagacgatctccgtttggatatcctcctgcgtatgttgaaaactccccacttc
agtgcaaaaatgaattcattgaaagaggttactaagctgattgaagacagtaccttatca
aaatctgtgaaaaatgcaattgatacagaccggttattggactggctcgtagaaaattca
gtattgtcaatagcacttgaaggaaacattgatcaagcacagtattgtgatagaataaag
ggaattattgagctgctgggcagtaaactctccatggatgaacttaccaagatttggcgc
attcagtcagggcagtcctcaaccgtcattgaaaatattcacactattattgctgctgct
gctgcaaagttcaactatgatcaactgaaccatctcttcatcctgatacagaagagttgg
gagattgagagtgaccgaatccgacaaaaactgctcagtcttatcggaaaaattggccga
gaagcacgttctgagaacaccacaggaaaggtgctggaggtgctttgggagcttgcccat
ttgccagcactacccacaaatttagtccagcaggcactggaagagcatctcaccatactt
agtgaagcttatgcagtaaaggagcaaatcaagcgaagttatatcattaaatgtatcgag
gatattaagaagtcctctcagcaaaataaccaacatccagtatgggtggttccagcttta
cgtcagcttcatgagattaccaggtccttcattaaacaaagctgtcagaaacaagacaag
agcattgtccaggatttgaagaagaactttgaaatagtgaaactggttacaagtagcctt
gtggcatgtcatcgactggctgtttctgcagctggtgcaggaggactaacggggtcaaca
gttgttgatggcagatacacacatcaagattacctagaggcacatttgaggtttcttgca
ttttttcttcaagaagccagcctttacttaggctggaaccgtgccaaagagatttgggag
tgcctagtaactggattagatatttgtgaactggatcgagagatgtgttttgaatggttt
accaaaggacatggagacttggagagtgatatacagcaacagctctttaaagagaaaatc
ctcaaactggaaccctacgagatcaccatgaatgggtttaatctcttcaaaacttttttt
gagattgtaaatctttctgatcatcgattaaagaaacaaggtgctcagctgcatgttgaa
aaactggaactagcaggaatggacttcatctggagaattgccatggagtcaccagatgaa
gaaattgcacacgaagcaatccatctgatcattaattatagctacatcagccttaatcct
cgtttaaaaaaggactctgtttcccttcataagaaattcatagcagattgctacaaacgt
ttagaagttgctagttcagcactaggtggccctactttgacacatgctgttacaagggct
actaaaatgctgacagctacagccatgcctactgtagcgacatcagtgcagtctccatcc
aggtccagtaaacttatcataattgaacggctgctgttgcttgcagaaagatatgtgatc
acaatagaggatctgtattctgttcctcggacaatcttgcctcacggtgcctcgttccat
ggacatcctgtaactatctcagtcatctgcgaatccacaaaagaaacatttagtatagag
gctcacagcaatgagactattgggagtgtcaggtggaagatcatatcgcatgtcaactgt
ccgttggataacctgcagatatttgctaatgatagcttgctgaccatgaacaaagatcaa
aaattgctccaccaactgggattttcagatgaccaaatattaacaataaagacgcctgtg
atgggtacagcatcagggagttcagttgactcatctgccagcagtggtgtgttcaactcc
gcttatgttatggaacaggagaaatcactgcctggtgttgtgatggcactggtttgtaat
gtgtttgatatgctttaccaactcgccaaccttgaagaaccaaggataacagtgcgtgtt
aggaagttgctgttattagttcctactgatccagcaatccaagaagctctggatacactt
gatgctttaggcagaaaacagaaaaccttactgactgattcaagtcatcaaacatcaaag
tcaccctcgctctcttcgaagcaacaacatcagcctagtgcaaacactattttggagagt
ctgttcagatcatcggcacctgggatgtccacctttagagtactatataacttagaggtt
ctcagttccaagctgatgcctacatcagacgatgaaatggcaagaaactgtgctaaatct
ttctgtgaaaacttcctcaaagcaggaggtttgagtttggtggtgaatgttatgcagaga
gattccattccatctgaggtggactatgagacaaggcaaggagtttattcaatctgccta
cagcttgcaaggtttctgttagtaggccaaactatgccttctactttagatgacgatttc
ctgaaggatggaatggaagcattgtcctctcgcccatttcgcaatgtcagtcgacagagt
agtcgacaattatctatgtgtggcagtcaagaaaagtcaacaatgaggcagatgagtgtg
acatcagatcggtcatctatcagaattgaggagattatacctgctgccagagtggcaata
caaacaatggatgtgaatgatttcacctcaacagtggcctgtttcatgaggctgacatgg
gcagcagctgctggacgtcttgacctggtggggagctgtcagccaattagagagagtacc
aattctctgttttctgttggtatccgaaataggctcagcagttcaggcagcacttgcagt
tcaggaagtgaaggtgaatcaactacactacatgcaggcatatgtgtgaagcaacactca
gtctccaccaaagatacactcattgctcgagaggccttatcgctcctagtgacatgttta
cagctccggtgccagcaacttggttctttttatgttcttccttgtgtgagtgatttcatc
attgacatactacttggatccccaagtgctgagataagaagagttgcctgggatcagttg
tacacactgagccaaacagatacctcaacaaacccagaaatacagaaacctaatcagttc
cttctgcatgtcatattgacaacacaactaccattgtggtccccaacgagcatcatgcgt
ggggtcaaccaaaggcttttgtctcagtgtactgaatattttggcttgaggtgccaattg
ttggatgacttaacatcttcggagatggaacagcttcaaattagccctgcagccatgtta
gaagatgaggttaactggcttgacaactttgaacccacatggactgctgaatcagagact
agtgagtcagataacgttctgctcgcaggacatctgcggcttatcaaaacgctactgtca
ctcagcggtccagagaaggaattacttgggccatcattaatcaaacaactcatggaagac
tttttgttccgtgcttcgaaaatcatcttgaccagcagcagtccagctgggagctgttca
gttagtcaacaggattttcacccaaagtgcagtacggtcaatagtcgacttgctgcttat
gaggtgctggttatgttagcagacagctctttgagtaaccttcagcttatctccaatgaa
cttctatcaatgcatcaccagtttgaccctgcactcacaaaggagtttgagtacttgcca
cctgttgatagccgctcggtgtctgggtttgtgggattgaagaatggaggagccacatgc
tatatgaatgcagtatttcaacaactttacatgcagcctggattaccagaggcaatgctg
tcagtagatgatgacgatgacgagaatccagaagagaatgttttctatcaggttcagtcc
ctcttcgggcacttgatggaaagcaaattgcaatattatgtcccagagactttctggaag
atttttaaactttggaataaggagctatatgtacgtgaacaacaagatgcgtatgagttt
tttaccagtctaatagaccaattggatgagcaccttaagaaacttggacgtgaacagttt
ttcaagaacactttccagggtatcttctctgatcagaaaatctgcaaagattgtcctcac
agatatgagcgtgaggaagcgttcatggcactgaacctgggagtgacatcctgccaaagc
ctggagatttcactggatcagttcgtgcgaggcgaggtccttgaaggaggcaatgcatac
tactgtgagaagtgtaaagaaaagaggacaacagtgaagcgcatgtgcataaagtctcta
cctagtgtgttagtcatccatttaatgagatttgggttcgattgggaaagtggacgttct
atcaagtacgatgaacaaatacggtttccttggcttttaaacatggaaccgtatactgtg
tctgggatggcacgacaagagcattcttctgagcatggtgaaaatggcaaagcaggtgac
cacttgggtggaggctctcctcgaaagaaaggtgcgccaactgaaaactatgagctggtt
ggagtgattgttcatagtggccaggcacatgctgggcactattactcattcattaaggat
aggaggactggtggcaaaggaaaatggtacaaattcaatgacaccgtggtggaagagttt
gatctaaatgatgagacattggagtttgaatgttttggtggagagtatagacctaaagtg
tacgatcaatcaaacccctatcctgaagtccgtcgccgatactggaatgcctacatgttg
ttttaccagcgaatgctggatcaaaattctcctgttttaccaaagaaaagccgagttagt
gttgttcgtcaggaggcggaggatctatcattatcagctccctcttcacctgaggtttca
cctcagtcatcacctcgtccacatagatcaaacaacgaccgcctttccctgttaactaag
ctggtaaagaagggggagaagaagggactctttgttgaaaagttaccagccagaatttac
cagatggtacgagatgagaacttaaagttcatgaaaaacagagacattttcaacagtgac
tacttcaatttcatgctttccttgatttcactcaacgcaactaaattgaaacaccctatg
taccaaaccatggcgaaggtcagcatgaaactagccatccagttcctcttccagacttat
ttgcgaactaagaaaaaactcagggtggacacaggagaatggattaccctcattgaaagg
ttgctttcaaatagttgtgaggcatgccagtggctgattgaattcctgattggatgtgag
ggacgagaattaataaagatttttcttctggagtgttctgtccgggaggttcgaataact
gttgctaccatcctagaaaaaaccctggagagtgccttgctttatcaggaaaagctcaga
ggattggaccagttgttggatgtgctgctttctttacttgacaaggatgtagctgagaat
tgcaaaaattgctcccagtacttcatcctcttcaacaactttgtacagaagggtttcaag
gcatgccagctactattcaaacactctgcattcaaacacatgctttgttttcttttgggc
ccatcaaggcagaacaatcagaatcggcgctggagctcagcgcaggccagagaattctgg
tatctccatatcactttggcatcactagtcctacacactgacatttcatctctgatgact
gttgatcctggaccatataaatggcatacgccatccccacaggtacctttgcatcaagat
gtggaaacactcttcagacctgaaggacaggcctacctgcttgaggttatgtatgctatg
cgagagctgacgggatctttgtcagtcatctctgatatggtgacttattgctgtttctgc
aatgagcacttctccttggtgcaagtcctacagataattaagagtcagttggagacagct
ccacctcatgaactgaagaacattttccagttactgcatgaaattctggtcattgaagat
ccattgcaatctcgtcgcctgaagtttgccttcgaatcagaaaaagggctgctagccttg
atgcatcagagcaacaatgttgacagcagtcgctgctaccagtgtatcaaattcttggtc
ctattagctcaaaaatgtgcagctgctaaggattattttcgggaacatcctcaccactgg
agctgggctgtgcaatggttacaaaagaagatgtcggaacattactgggccccacagagc
aacatatcaaatgaaacttcaacagcaaagacatttcagcgcacaatttcagcacaggat
acattagcctatgctacagcccttctgaatgagaaggagcaatctgggagtagtaatggg
tcagatggcagccctgctacagagaatggagatagaactctccggcagggctctgaatct
cccatgatgcttggtgattctaaaagtgaccttgatgaaatggacccataa
DBGET
integrated database retrieval system
