Rhincodon typus (whale shark): 109928381
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Entry
109928381 CDS
T06055
Name
(RefSeq) vesicle transport protein SEC20 isoform X3
KO
K08497
protein transport protein SEC20
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
109928381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109928381
Membrane trafficking [BR:
rtp04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
109928381
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
DUF2357
MCPsignal
Motif
Other DBs
NCBI-GeneID:
109928381
NCBI-ProteinID:
XP_020383949
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All DBs
Position
12:complement(21091642..21111086)
Genome browser
AA seq
229 aa
AA seq
DB search
MAVAPDVLVRICAQEIIKYDLEIKALVQDIRDSTGPLSILTELNAKVKVMFQQLRLRIQD
LEQMAKEQDKESDKQTLLAEVENHRKQMLSNQTAWRKANLACKLAIDNYEKDELLHSGDS
SIRQRKMTKEGLVQTASSITESLMSISRMMSQQVQQSEESVQTLATSSRTVQETNEEFKN
MTGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVVYILKKRLFPFL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggctccggatgttcttgtcagaatctgcgcgcaagaaatcatcaaatatgat
ctggaaataaaagcgctggtccaggatatcagagacagtactggacccttgagcatactg
acagaattaaatgctaaagtgaaagtaatgtttcagcaactccgacttcgaatacaggac
ttagaacagatggcaaaggaacaagacaaagaatctgataaacaaactctgctggctgaa
gtagagaatcatcgcaagcaaatgttaagcaaccaaacagcttggcgaaaagcaaaccta
gcctgcaagcttgctatagacaattatgaaaaagatgaattgctgcatagtggtgattct
tcaattcggcaacgaaagatgacgaaggaaggcttggtacagactgcaagcagcattacg
gagagtttgatgagtatcagtaggatgatgtcacaacaagtgcagcagagtgaagagtca
gtgcagacactagcaacatcatcaaggactgttcaggagacaaatgaagaatttaaaaat
atgactggcaccattcagctggggcgcaagttgattacaaagtataatcgtcgagagttg
actgacaagctgcttattttcctagctttggctctgtttttggcaacagttgtatatatt
ttaaagaagcgcctgtttcctttcttatag
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