Rhincodon typus (whale shark): 109928543
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Entry
109928543 CDS
T06055
Symbol
chst1
Name
(RefSeq) carbohydrate sulfotransferase 1
KO
K01022
keratan sulfate 6-sulfotransferase 1 [EC:
2.8.2.21
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00533
Glycosaminoglycan biosynthesis - keratan sulfate
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
109928543 (chst1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtp01003
]
109928543 (chst1)
Enzymes [BR:
rtp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.21 keratan sulfotransferase
109928543 (chst1)
Glycosyltransferases [BR:
rtp01003
]
Unclassified
Sulfotransferases
109928543 (chst1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
Motif
Other DBs
NCBI-GeneID:
109928543
NCBI-ProteinID:
XP_020384080
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All DBs
Position
17:42809752..42835797
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AA seq
445 aa
AA seq
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MTSHRFRAMECSWKAVLLLVVASLTIQYTAIRKFIAKPFTICRVPKHTGCRPGPGASCEP
QRRAVSHILILATTRSGSSFIGQLLNQHSDIFYLFEPLYHVQTTLGAGSRGRPSSSTSAA
GRRLLLGAYRDLLRGLFECRLHELEAYIKPAPEQHRTQRLFRRGASKALCSPPVCAPATS
TPRPPAGPGMQTSDREGDSNDGEGAPSERWEEGECVRRCGALNLTEASRACILRPHVAIK
TVRIPAIGDLKALVEDPRLNLKVIQLVRDPRGILSSRIDTFPDSFRAWKIWRNSGRRPFN
LDASHLNATCQDFLQSVGTGLARPDWLKGRYMLVRYEDLAREPERKTREMYRFLGVAMDT
NVRRWIVRNTRGPGASGNHKFATVRDSAATAEGWRFKLSYDMVELVQNLCNLTLAQLGYR
IVNSPEELRNTSVSLAEDRTFLPFL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaccagccacaggtttagggccatggagtgttcctggaaagcggtgctgctgctggtc
gtagcctcgctgaccatacagtacacggccatccgaaagttcatcgctaagccgttcacc
atctgccgcgtccccaagcatacgggctgccgcccaggtccgggtgcgtcctgtgagccc
cagcgccgggcagtcagccacatcctgatcctggccaccacccggagcggctcgtctttc
atcgggcagctgctgaaccagcactcggacatcttctacctgtttgagccgctctaccat
gtgcagaccacgctgggagccggctccaggggcaggccgtcgtcctcgacctcggccgcg
ggcaggcgcttgcttctcggcgcctaccgcgacctgctgcggggactcttcgagtgccgg
ctccacgagttggaggcttacatcaaaccggctccggagcaacatcggacccagcggctc
ttccgccgaggggccagcaaagcgctgtgctcgccgcctgtctgtgccccggccacctcg
actccgaggcctccggccgggccgggaatgcagacctcggacagagagggcgacagcaac
gacggggaaggcgctccatccgagcgctgggaggaaggcgagtgcgtgcggcggtgcggt
gccctaaacctgaccgaggcttcccgggcctgcattctgaggcctcacgtcgccatcaag
acggtgcggatccccgccatcggcgacctcaaggcgctggtcgaagaccctcgcctcaac
ctcaaggtgatccagttggtgcgcgacccccgcggcatcctgtcgtcccgcatcgacacc
ttcccggacagtttccgcgcctggaaaatctggcgcaacagcgggcgcaggcctttcaac
ctggacgcatcgcatctgaacgccacctgccaggatttcctgcagtcggtggggaccggc
ctagctcggcccgactggctcaaaggccgttatatgttggtccgttacgaggacctggcc
cgcgagcccgagcggaagacgcgcgagatgtaccgctttctgggcgtcgccatggatacc
aacgtgcggcgctggatcgtccgcaacacccgcgggcccggagcgtcgggcaaccacaag
ttcgccacggtgcgggactcggcggccacggccgagggctggaggttcaaactgagctac
gacatggtggagctggtgcaaaacttgtgtaacctgaccctggcccagctcggttacaga
atagtcaactcgcccgaggagctgagaaacacgtccgtcagcctcgctgaggacaggacc
tttctgccttttttgtaa
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