Rhincodon typus (whale shark): 109928549
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Entry
109928549 CDS
T06055
Symbol
cdcp1b
Name
(RefSeq) CUB domain-containing protein 1
KO
K06732
CUB domain-containing protein 1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
rtp04090
]
109928549 (cdcp1b)
CD molecules [BR:
rtp04090
]
Proteins
109928549 (cdcp1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDCP1_CUB_6
CUB_CDCP1_2
CUB_CDCP1_1
CUB
CUB_CDCP1_4th
CUB_M02D8_5_1st
CdiI_3
Motif
Other DBs
NCBI-GeneID:
109928549
NCBI-ProteinID:
XP_048472230
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Position
2:142297287..142354220
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AA seq
630 aa
AA seq
DB search
MISVTAREGMTINIKQAPGSLQASDCKICITEEECYNDYQVNPGDDFQFDFSCSEPEQSF
VVEVQTDIESAEADLEDVVNLLELPQLNRTYIWNITVPYKVGVHMSFAGNHLEQIDSAEC
EDSLTYTIKGHLSSDPTSTVLVGNFCRNGTISNVKVQGKTLIELKVPWTEMIEKAGFQLF
FVPAIGKFSIVEVVLQPGSPAYFMSADWPEGFPNDELMSWRFTVPSKYHANVTIETFTLP
KCIKRKAGVYNGPPVLGKMEGKYRADFIISLQNCDMDQTSSEVLTFRFKVDLLRYRESYE
IKLSEGVSMVFKQISETAGDASPLLCICSFPESTSNCSSKLQLEAGDHLNISFNSRCDTT
RDVIIETTKNISCKDAEECPVRNVDLALPGVLSELPVAHHTFKWVLTQPSELTIELASER
LKLQQLLQGDVCDGNLMYNVSTFSQDGARSVVGQFCPNGAMERIQTADHVLLELRTSHGW
DPKDVDIKLSFIPHLTEDYIMNIIPDVNSLVYLLSPNWGPGMPNKLTASWNISVPPDHVA
ELTFVEQSIPKCEHGHVTIVIIEQITDGTHLSYRESDTIPQSLPELYHRFWLNVSNCETS
SGRLNLKFQVLVREGEDSNICLPWGPTIQV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgatctcagtcactgctcgtgaaggtatgactataaacatcaagcaagcacctgggagt
ttacaggcttctgactgcaaaatctgtatcacagaagaagaatgttacaatgattatcag
gtcaatccaggagatgatttccaatttgacttcagctgcagtgagcctgagcagagcttt
gttgtcgaagttcaaacagatattgaaagtgcagaggctgacctggaagatgtggtgaat
ctgctggagttgccgcagctcaacaggacgtacatctggaacatcactgtgccttacaaa
gtcggcgtacacatgagctttgctggcaatcacttggagcagatcgactcagctgagtgc
gaggattctctcacatacaccatcaagggccacttaagttccgatcccacaagcactgtc
cttgttggtaacttttgtcggaatggcaccatctccaatgtgaaggttcagggcaaaaca
ttgattgagcttaaagtgccctggactgagatgattgagaaagcaggatttcagctgttc
ttcgtacccgctattggaaagttcagcattgtcgaggtggttctgcagccgggctctcct
gcctacttcatgtcagctgattggcccgaaggctttccaaatgatgagctgatgtcctgg
cggtttacagtcccttccaaataccatgctaacgtcaccattgagacgttcaccctccca
aagtgcattaagaggaaagctggcgtgtacaatggcccacccgtgcttgggaaaatggag
gggaaatatcgagcagactttattatatctttgcagaactgtgacatggaccagacaagt
tctgaagtgctaacttttaggttcaaagttgatctccttcggtacagagagagttatgaa
attaaactgagcgagggtgtttcgatggtatttaagcagatctcagagacggctggagat
gcatctcccctgctttgtatctgcagcttccccgagtcgacctccaactgtagctccaag
ttgcaactggaagctggagaccacctgaacatctccttcaactccaggtgcgacacgacg
cgggatgtcatcatcgaaaccaccaagaacatctcctgtaaagatgcagaagagtgccct
gtcaggaatgtggacctggccttgcctggggtactctcggaactgcccgtagctcaccat
actttcaagtgggtgctcacgcagccgtcggaactaaccatcgagttagcatctgagcgt
ttgaagctgcagcagcttcttcagggcgatgtgtgcgatggcaacttgatgtacaatgtc
agcactttcagccaggatggtgccaggtcagtggttggccagttctgtcccaatggagcg
atggagaggatccagacagctgaccacgtgttactggagctgaggacgtcacatggctgg
gaccccaaagatgtggatatcaaactctccttcattccccatctcacagaggactacatt
atgaacattatcccggatgtcaactctctggtgtacctcctgagccctaactggggtcct
ggaatgcccaacaagttaacagcatcgtggaatatctctgttcctccggatcacgtggct
gagcttacttttgtagagcagtcgatccccaaatgtgaacatgggcacgtgaccattgtg
atcatcgagcagatcactgacggcacccacctgagctacagggaatcggacacgatccca
cagtcgctccccgaactgtaccacaggttctggctgaatgtatccaactgcgagacttca
agtggacgcctgaacctgaagtttcaggtgctggtacgtgaaggagaagacagcaacatt
tgcctgccctggggacctacaatccaggtgtga
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