Rhincodon typus (whale shark): 109928552
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Entry
109928552 CDS
T06055
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109928552 (exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109928552 (exosc7)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109928552 (exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
109928552 (exosc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
109928552
NCBI-ProteinID:
XP_020384090
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MAAVVLSEAEKVYLMHGVQDDLRIDGRGCEDYRHTEVETDVVSNTSGSARVKIGHTDILV
GVKAEMGTPKLERPNEGFLEFFVDCSANATPEFEGRGGEDLGTEIANTLYRVFDNSSTLG
LKTLCITPREHCWILYVDVLLLECGGNLFDAISIAVKAALHNTRIPKVRVLEDDEGAKEI
ELSDDPYDCIRLNVENVPCIITLSKIGHRHVVDATSQEEACRMASLLVSVTSKGTITCFR
KVGGGSLDPESIFEMLETGNRVGKALHISLQTALEKEESLGRKRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagtggtgctgagcgaggcggagaaggtctatttgatgcacggagtgcaggat
gatctacggattgacggtcgtggatgtgaagattatagacacactgaggtagaaacagat
gttgtgtcgaacacaagtggatctgctagagtgaaaattggtcacacagatattctcgta
ggtgttaaagctgaaatgggcacacctaaactggagcgaccaaacgaaggttttttggaa
ttctttgtggactgttctgccaatgcaacccctgagtttgaagggcgaggaggagaagat
ctgggcacagaaatcgccaacaccctgtacagagtgtttgataacagcagtaccttgggg
ttgaagacactgtgtattactcccagagaacactgctggatcctctatgtagatgtactg
ttgttggagtgcggtggaaacctttttgatgcgatctctattgcagttaaagcagcactt
cataatactagaattccgaaagtccgtgtgctcgaagatgatgagggtgccaaggaaatt
gagctctctgatgatccatatgactgcattcgactcaatgtggaaaatgtaccttgcatc
atcactttaagcaaaattggtcacaggcatgtagtcgatgccacttcgcaggaggaagcg
tgccgcatggccagcctgctggtttccgtcaccagcaaagggaccatcacttgcttcagg
aaagttggaggaggcagtttggatccagagagtatctttgaaatgttagagacaggaaac
agagttggaaaagctttgcatatatctttacaaaccgctttggagaaagaagaaagttta
ggaaggaaacgtcaaaaagttggatttcttggttga
DBGET
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