Rhincodon typus (whale shark): 109928633
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Entry
109928633 CDS
T06055
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B-like
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04060
Cytokine-cytokine receptor interaction
rtp04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109928633
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
109928633
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rtp04052
]
109928633
04090 CD molecules [BR:
rtp04090
]
109928633
Cytokines and neuropeptides [BR:
rtp04052
]
Cytokines
Tumor necrosis fators
109928633
CD molecules [BR:
rtp04090
]
Proteins
109928633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
LAP1_N
MDFI
CENP-Q
Motif
Other DBs
NCBI-GeneID:
109928633
NCBI-ProteinID:
XP_020384153
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All DBs
Position
37:6712820..6757928
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AA seq
286 aa
AA seq
DB search
MNADQEKTGFDIQHRCLIYSACVFTSAALMSAYVAAVALHHVLALRAEISSMREELETYK
FQLDHLAKGTKGQAANGSSSVNQVSEFLTTKLHSVEKLSDGEVKFRSRRSLPEQIQQSFV
QLIATNDQRPVVRASNCQKCIPGRHQQTCRVERRSVLNQNHAEETIVPWILSLRKGTALD
KKENKISVKEAGFFLIYSQVWYKDNIFTMGHFVKRIKANIVGNEPQTSILFRCIQNMPAC
CPNNSCFTAGVAKLEAGDELELVIPRLQAHVALNGDGTFFGAIQLI
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagaccaagaaaagactggcttcgacatacaacacagatgtttgatctactca
gcctgtgtcttcacctcagcagccctgatgtcggcttatgtagcagcagttgctttgcac
cacgtcctcgcattgagggcagaaatctcatcgatgagggaggagctggagacctacaaa
ttccaactagaccatttagctaaagggaccaaggggcaagcagcgaacgggagcagctca
gtcaatcaggtcagtgaatttctcacgacaaagctgcacagtgtggagaaattaagtgat
ggagaagtgaaatttcgaagcagaaggtcacttcctgaacaaatccagcagtcgtttgtg
caactgattgcaacaaatgaccaaaggccagtcgtaagagccagcaattgtcaaaaatgc
atcccaggaaggcatcaacaaacctgtcgagttgaacgaagatctgttttgaatcagaat
cacgcggaggagacaattgtcccatggattcttagcttgagaaaaggaactgctctcgac
aaaaaagagaacaagatctccgtgaaagaagctggtttctttctgatttacagtcaagtg
tggtataaggacaatatttttacaatgggacatttcgttaaaagaatcaaggccaacatt
gttggcaatgagccacagacctcaatcctatttcgatgcatccaaaacatgcctgcctgt
tgtccaaataattcttgcttcactgctggtgttgcaaagcttgaagcaggggatgagctt
gaacttgtaataccacgactgcaagcccatgttgcattaaatggagatgggacattcttt
ggagcgatacaactgatataa
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