KEGG   Rhincodon typus (whale shark): 109928826
Entry
109928826         CDS       T06055                                 
Symbol
rnf4
Name
(RefSeq) RING finger protein 4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rtp04121]
    109928826 (rnf4)
Enzymes [BR:rtp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109928826 (rnf4)
Ubiquitin system [BR:rtp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109928826 (rnf4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-C3HC4_3 Prok-RING_4 zf-UDP zf-RING_4 zf-C3HC4_4 zf-rbx1 RING_XB3-XBAT31 zf_RING_Vps8 Rtf2 zf-RING_11 zf-RING_16 zf-P11 zf-RING_6 TRAF3_RING zf-ANAPC11 zf-Nse
Other DBs
NCBI-GeneID: 109928826
NCBI-ProteinID: XP_048450457
LinkDB
Position
3:complement(121777961..121834227)
AA seq 207 aa
MSTTQRKRRMMPQQSRRARRQRRSLEPAEPEAEIVETGAEVVDLTCESSEPVVVDLTNND
SVEIVDEDLSSSNSQPSSADDQPGRTQSDSCILCSDEEDTRADGSSSVSVTSAAAVPQGN
RLHPALCNKDLRCVQNLAHRRAGSGTISCPICMDGYTEIVQSGRLIVSTKCGHVFCSQCI
RDSLKNSHMCPTCRKKLNTRQYHPIYI
NT seq 624 nt   +upstreamnt  +downstreamnt
atgagcacaacacaaaggaagcgtcggatgatgcctcagcaatccagaagggcacgccgc
caacgcagatcactagaaccagctgaaccggaggctgaaattgtagagactggtgcagaa
gtagttgacttgacctgtgaatcctctgagcctgtggttgtcgacctaaccaataatgat
tctgttgagatcgtggatgaagatctgtcctcctcaaatagtcagccaagttctgctgat
gaccagccaggcagaacgcagtcagacagctgtattctctgcagtgatgaagaagatacc
agagcagatggaagtagcagtgtgtctgtaacaagtgcagcagctgtacctcagggaaac
cgtcttcatcctgccttgtgcaacaaagacttaagatgtgttcaaaatcttgctcaccga
agagctggttcaggaacaattagctgccccatatgtatggatggttacacagagattgtt
caaagtgggaggcttatcgtctcgacaaaatgtggtcacgtcttctgcagccaatgcatc
cgggacagtctcaaaaattcacacatgtgtccgacttgcagaaaaaaattgaatactcgc
cagtatcatccaatttacatttga

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