Rhincodon typus (whale shark): 109928841
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Entry
109928841 CDS
T06055
Name
(RefSeq) DDB1- and CUL4-associated factor 8-like
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109928841
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109928841
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_EML
EIF3I
NBCH_WD40
Beta-prop_Vps41
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
109928841
NCBI-ProteinID:
XP_048476728
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All DBs
Position
48:complement(5612964..5635637)
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AA seq
575 aa
AA seq
DB search
MGDRSNELDLKPDFRNGSLSSSPEDTEEARESSSGIEVEASDLSLSLTGDEHMAEDEEEA
DGERRGEGGRHGTEKESSDERDSDSLEDTGTYSIVDEEEDEEDEEGEEREEEESKMEDGQ
PEPRARRRRGPKRASEPERDSSEEEAALERWVHSEVAALPPPTWCAAPALGGREIGRDPR
AFMYRACGARTFVERLRLQHSLEHHAGCVNTLHFNRRGTWLASGSDDLKVVIWDWARRKP
VLEFDSGHKSNVFQAKFLPNSGDSTLAMCARDGQIRIAELSATECCKSTKRVAQHKGSAH
KLALEPDSPCTFLSAGEDAVVFAIDLRQERPASKLVVTKEKDKKVGLYTIYMNPSNTHQF
AVGGRDQFVRVYDQRKINENENNGVLKKFCPHHLINSESKANITCLVYSHDGSDLLASYN
DEDIYLFNSSHSDGADYVKRYKGHRNNATGQLLALLDCPTRAGHRFHFFFVLEGYPKWGW
LLGTSTINDADESIRLPEKPIWYIDVFEGRKPALISSQKEEDGSVMLSHFDILRITQCQT
TYSAKIDCCRLAHFKIQDYVLSDVLKVWAAIAKAH
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgggggataggagcaatgaactggatctgaagcctgacttcaggaatggcagcctgtcc
agtagccctgaggacaccgaagaggcccgtgagtcctcatcgggtattgaggtggaagcg
tccgatctgagcctgagcctgactggggacgagcacatggcggaggacgaagaggaggca
gacggggagcggcgaggggaagggggcaggcacgggactgagaaggagagctcagatgag
cgggactcggactccctggaggacaccggcacatactccatcgtggatgaggaggaagac
gaggaggatgaggagggagaggagcgggaggaggaggagagtaagatggaggacgggcag
ccagaaccacgagcccggcgccgccgagggccgaaacgagccagtgaaccggagcgtgat
tcctcggaggaagaggctgcgctggagcgctgggtgcactcggaggtggcagctttacct
ccgcccacctggtgtgctgctccggccctggggggccgtgaaattggtcgggacccccgt
gccttcatgtaccgggcgtgcggagcgcggacctttgtggaacgcctgaggctgcagcac
agcctggagcatcatgctggctgtgttaacacgctgcactttaaccgccgtgggacctgg
cttgccagcggcagtgacgacctcaaggtggtaatctgggactgggctcggcggaaacct
gtcctcgaatttgacagcggtcacaagagcaatgtcttccaggccaagttcctgccgaac
agcggtgactccacgctggcgatgtgcgctcgtgacggccagattcgtattgctgagctg
tcagccacagaatgttgcaagtcaacaaagcgagtggcccagcacaagggctctgcgcac
aagctagcgctggagccggactccccctgcaccttcctgtcagctggagaggatgctgtg
gtctttgcgattgacctgcgccaagagaggccagcatcgaagctggttgtcaccaaggag
aaggacaaaaaggtcggcctgtacaccatctacatgaacccctccaatacccaccagttt
gctgttggagggagggatcagttcgtcagggtgtatgaccagcgcaagataaatgagaat
gagaacaatggtgtgctgaagaagttctgccctcatcacttaatcaacagcgaatcgaaa
gccaacatcacatgtctggtctacagccacgacggctctgacctgttagcgagttacaac
gacgaggatatctacctcttcaactcttcccacagcgatggcgcagattacgtcaagcgc
tacaaaggacatcgcaataatgccacaggtcagctactggccctgttggattgccccaca
cgggctgggcacagatttcatttcttttttgttttggagggctatcccaagtgggggtgg
ctacttggaacgagcaccattaatgacgccgatgagtctattcgattaccggaaaagccc
atctggtacattgatgtctttgagggaagaaaacctgctctgatcagcagccagaaggaa
gaagatggctcagtaatgctgtctcactttgacatcctgaggattacccagtgccagact
acttacagtgcaaagatcgactgttgcagactggcacatttcaagatccaggactatgtg
ctgagtgatgtgctaaaggtttgggcagctattgccaaggcacactga
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