Rhincodon typus (whale shark): 109929129
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Entry
109929129 CDS
T06055
Symbol
ccdc88ab
Name
(RefSeq) girdin isoform X3
KO
K25392
girdin
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rtp03037
]
109929129 (ccdc88ab)
Cilium and associated proteins [BR:
rtp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
109929129 (ccdc88ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
KASH_CCD
GAS
Motif
Other DBs
NCBI-GeneID:
109929129
NCBI-ProteinID:
XP_020384513
LinkDB
All DBs
Position
9:42641678..42984371
Genome browser
AA seq
1885 aa
AA seq
DB search
METDFTTLLEQFMSDPLVTWVKTFGALAPANGGALLEYMELVDGIFLSNIMVQINPKSEN
QRLNKKINSDLSLRIQNLSSLVHHIKLYYQETLQQLIMMSLPNVLVLGRTPFTEQGIEEM
KKLLLLLLGCAVQCERKEEFIERIKNLDFDTKAAVATHIQEVTHNQENVFDMQQWMELAD
LSREDLNVFFKKMAINLKRLVDERDEQCEIVLHLAQERDCNQSPVHGIAQSPAGSPGMQR
TESRQHLSVELADTKAKLRRIRQEMEEKTEQLLDYKQEVEQMEVELKRLQQENLQLLSDA
RSARAYRDELDSLREKAIKVEKLESEVIRYKDRLHDVEFYKARTEELKEDNKILLETKIM
LEDQLEGARARCDKLHEFEKENLQLMAKLHDMETVHDTDRKRIEELMEENLSLEMAQKQS
MDESLHLGWELEQLSKTTEVSEGAHKSLSQEVNELTSSRLLKMEKENQSLLKTVDELRSV
MDSTDGSNFKILELEKENQRLKKKMERLQGEISNEKQSMQNVEILSNDLIKEKTQLEKAI
ETIRENTEGQIKVLEQENEHLNQTIASLRQRAQISAEAKVKDIEKENKILHESIRETSGK
LNKLELEKKQIQKELEHYKEKGERAKELETLLSRFKRENEQLQKKVTTLIITCEKVEVLE
QENSDLEVENRKLKKTLDSLKNLTMQLDILEKENNQLDEENLQLRRTVESLKSNSVKLAQ
LELENKELENEKEQLNKSLDLLKACNKKTERLEVSYQGLDLENHRLQKTLENSNKKINQL
ENELQDLETENQSLQKNLEELKISSKRLLQLEKEHKLLEQETVQLEKDKKLLEKENRRLR
QQTEIKDSTLDENNMTISNLEKENKLLVKEINKFKDLHGRLKDLEKDNKELVKQATIDKK
TLVTLREELVNEKLNTQQMSNDLEKLTHELEKIGLNKERLLHDEQSTDDSRYKLLESKLE
STLKKSLEIKEEKIASLEARLEESTNLNQQLRQELKTVKKNYEALKQRQEEEKNVQCLQG
RPGEENQTTRKWERENQEVTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLEAQNNN
LQAQILALQRQTTSLQEHNTTLQTQNAKLQVEHSTLNSQSASLMTQNSQLQNQQLSLENE
NESLIKEKEELKLQYDSLIKDHEKLAKLHEHQATEYESLINKHGSLKFAHKNLEVDHKEL
EDRYNELLKQKTQLEELETILKKEQEKMHHEVEKHETMIHKYQKLQNENERLNQIYNHLL
KENEGLQLDHKNLKSLLNAAKLEHTRLEAEFANLKERYQQLDINSTKLNNQCELLSQLKG
NLEEENRHLLDQIQTLMLHNKSLLEQSMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIM
DQYKFYEPSPPRRRGNWIAIKMKKLIKHKKEGNRERVKSLSSTPTRSESSDGFLQLPHQD
SQDSSSVGSNSLEDGQTMKKSSMAALKRLPFMRNRPKDKDKMKALYRRSMSMNDLLQSMI
SAGAQWSGSSENLEEPNEVTTGQRRTELGSMAFSTTAINLATANSSGFRAKQRLKPKGVA
SNEDLLAHGPNFDNCSTGSRSRASRPASLDSSRTSSSNNNNNASAHDVKAGAVNGSHSRS
QSHSSGEYGPVYDDQVLLSSSLQYNHHIQNLEKDNSSFQHEEPRSDGTQAHSQQRNKATS
PGSEVVTLQQFLEESNVNQSPEVHSESHDNIFDDVFTKITDFPELVGTEKLNQEVINNGA
TVKSSGGREIADSITGKLQKSEQYMWPILRKSDRISVTSTAIEPTMVNQGKTVSVSELPI
MPQQPAQTDCCSSPILPRASHVISTAEGSNRRTSIHEFMSRDNRAPVSIDPSPGKVVTSA
RTLPNMGSVQELRSAQGKTEEQQSS
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atggagactgattttacaacgcttcttgagcagtttatgtctgatcctttggtaacttgg
gtgaagactttcggggcgttagctccagcaaatggaggagcacttttggaatacatggag
ttggttgacggcatctttctcagtaacatcatggttcaaattaatcctaaatcagaaaat
caaagactgaacaagaaaataaacagtgatttgtcactccgaattcaaaatttatccagt
ttggtgcatcatattaaattgtattatcaggagactttacagcagttaattatgatgtct
ctaccaaatgtccttgtcctgggccgaacccccttcacagaacaaggtattgaagagatg
aaaaaacttcttctgcttctgctaggctgtgctgttcagtgtgagcgaaaggaagaattt
attgagaggataaaaaatcttgattttgatacaaaggctgctgttgcaactcatattcaa
gaggtgactcacaatcaagaaaatgtctttgatatgcagcagtggatggaattagctgat
ctctcccgtgaggaccttaatgtctttttcaaaaaaatggcaattaatctgaaaaggctt
gtggatgaaagagatgagcaatgtgagatcgtgttacatcttgcacaagaacgtgactgc
aatcagtctccagtccatggaatagctcagtcacctgctggatccccaggcatgcagcgt
actgagagccgacagcatttgtctgttgaactagctgacacaaaagcaaaactcagacgg
atcaggcaagaaatggaggagaaaactgagcaattgttggattataaacaggaggtggaa
cagatggaagttgaactaaaaagacttcaacaagagaacctacaacttctgtcagatgct
cgttccgctagggcatatcgtgatgagcttgattcattacgtgaaaaagcaattaaagtt
gaaaagcttgaaagtgaagttatacggtacaaagaccggctacatgacgtagaattttac
aaagcaagaactgaggagttaaaagaagataacaaaatcttgttagagacaaaaataatg
ttggaagaccaacttgagggagcccgagcacgttgtgacaaattgcatgaattcgagaaa
gagaatctacagttaatggctaaattacatgatatggagacggtacatgacacagataga
aagcgtattgaggagttaatggaagaaaacctcagtcttgaaatggctcagaaacagagc
atggatgaatcattacacttgggttgggaactagaacagttatccaagaccactgaagta
tctgagggggcacacaaatccctgagccaggaagtgaatgaattgacctcaagtcgtttg
cttaagatggagaaagaaaaccaatcactgctcaaaactgtggatgaacttcgcagtgtc
atggattccacagatggcagtaactttaagatcctggagctagaaaaggaaaaccagaga
ctgaaaaaaaagatggagagactccagggagagatcagcaatgaaaaacaaagtatgcaa
aatgttgaaatactcagcaatgatcttataaaagagaagacccagcttgaaaaagctatt
gaaaccattcgagaaaatacagagggacaaatcaaagtattggagcaggaaaacgaacat
ttgaatcagaccattgcatccctgaggcaacgtgcacaaatcagtgcagaagctaaagtg
aaagacattgagaaagaaaacaaaattctacatgaatctattagggaaacaagtggcaaa
ctgaacaaattggagttggagaagaaacaaatccaaaaggagttagaacactataaagag
aaaggagaaagggcaaaggaacttgagactcttttgagccgcttcaaaagagaaaatgaa
cagttgcaaaagaaggttactactctaataattacatgtgaaaaagtcgaagtcttggaa
caggagaactccgatctagaagtggaaaacagaaagctgaaaaagactttggatagcttg
aaaaaccttacaatgcagttagatatattagagaaagaaaacaaccaacttgatgaagaa
aatttacaattgaggaggacagtggagagtttgaagtctaatagtgtcaagttggcacaa
ttagaactagagaacaaagaactggaaaatgaaaaagaacaattaaacaagagcctggat
ctcttgaaggcttgtaacaaaaaaactgaacgtttggaagtaagttatcaaggacttgat
ttagagaatcataggctccagaagactctagaaaatagcaacaagaaaattaatcagctg
gaaaatgaattacaggacttagaaacagaaaaccagagcttgcaaaaaaatttagaagaa
ctaaaaatttccagcaaacggttgctacaattagagaaagaacacaagctgctggagcaa
gagactgtccaactggagaaagacaagaagctgcttgagaaggaaaataggaggctgcgc
caacagactgagatcaaggactcaacactggatgaaaacaacatgacaatttctaatctt
gaaaaagaaaacaaattacttgtgaaagaaatcaacaaattcaaagatcttcatggacga
ctgaaagatttagaaaaagacaataaagagctagttaaacaggcaactattgataagaag
actctagtgacattgagagaggagcttgtaaatgagaaattaaatactcagcaaatgagt
aatgacttggagaaattgactcatgaactggaaaaaattgggttgaacaaggagcgcctt
cttcatgatgagcaaagcacagatgatagcaggtataaacttttggagtccaagttagaa
agcactctaaaaaagtctcttgaaataaaagaagagaaaattgccagtcttgaagcacga
ttagaagaatcaacaaatttgaaccagcaactacggcaggaattaaagacggtgaaaaaa
aactacgaagctctcaagcagagacaagaagaggaaaaaaatgtgcagtgtttgcaaggt
agacctggtgaagaaaaccagactacaagaaaatgggagcgagagaaccaagaagtaact
cgcgaactgttgaaggttaaagatagactaattgaggtcgaaaggaataatgcgactctt
caggctgagaaacaagccttgaaaactcagctgaaacagctagaagcccaaaataacaac
ttgcaagctcaaatccttgcacttcagcgacagacaacatctttacaggagcacaatacc
accttgcaaacacagaatgccaagctgcaggtagaacattctacccttaattctcaaagt
gcatccttgatgactcagaattctcagcttcagaatcagcagttgtcattggagaatgaa
aatgaatcattgataaaggaaaaagaggagttgaaattacagtatgattcgctcatcaag
gatcacgagaaactagctaaattacatgagcatcaggcaacagaatacgagtccctcatc
aacaaacatggaagtttgaaatttgctcataaaaatttagaagttgatcataaagaactt
gaggacaggtataatgagttgttgaagcaaaaaacccagttggaggagctggagacaatt
ttgaaaaaagaacaagagaaaatgcaccatgaggtagagaaacatgagaccatgatacac
aagtaccagaaacttcaaaatgaaaatgaaaggttgaaccaaatatacaaccacttgtta
aaggagaatgaaggattgcagttggaccacaagaatcttaaaagcttgctgaatgctgca
aaactagagcatactcgattggaagctgaatttgcaaacctgaaggaacgttaccaacag
ttggatatcaattccactaaattaaacaaccaatgtgagctactgagccaattaaaaggg
aatcttgaggaagaaaatcgacatttgctagaccaaatccagacattaatgctgcacaac
aagtcattgttagaacagagcatggagagtaaggatctgttccatgtggaacaaagacag
tacattgataaattgaatgaacttcgacgacagaaggagaaacttgaagagaagattatg
gatcagtataaattttacgaaccatcaccacctcgaagacgagggaactggattgcaata
aagatgaagaaattaataaaacacaaaaaggagggaaaccgagaacgcgtcaaatctctc
tcgagcactccaaccagatcagagtcaagtgatggattccttcagttgcctcatcaagat
agtcaagacagctcttctgtgggttctaactctcttgaagatggtcagacaatgaaaaag
agcagcatggctgcactgaaaaggctgccctttatgaggaacagaccgaaggacaaagac
aaaatgaaggccctctaccgtcgctccatgtccatgaatgatctgctccagtctatgatc
tcagcaggcgcacaatggtcaggcagttctgaaaatttggaggaacctaatgaagtgact
actggacagaggaggacagaattgggatccatggcattttccacaacagctatcaatcta
gccactgcaaattcttctggcttcagagccaaacaaagacttaagcctaaaggtgtagct
tcaaacgaagatttgctagctcatggacctaacttcgacaattgtagcactggatcaaga
agtcgagcttccagaccagccagccttgatagtagcaggacatccagtagcaataacaat
aataatgcttcagctcacgatgtaaaagcaggtgcagttaatggcagccacagtagatcc
caaagtcacagcagtggagaatatggtccagtttatgatgatcaagtattgttgagcagc
agccttcaatataatcatcatatacaaaatttggaaaaagacaactcatccttccagcat
gaagaacctagaagtgatggaacccaagctcattctcagcaaagaaataaagccacgtca
cctggaagtgaagtagttaccttgcaacagtttctggaggaaagcaatgtaaaccaatcc
ccagaggtacattctgaaagccatgacaatattttcgatgatgttttcacaaaaatcaca
gattttcctgaactggttggaaccgagaaattgaatcaagaagttatcaataatggtgct
actgtaaaatcatctggaggaagggagattgcagattctattactggcaaattacaaaag
tctgaacaatacatgtggccaattcttcggaaatcagaccgcatctctgttacaagcact
gcaatagagccaaccatggtaaaccaaggaaagactgtgtcagtcagcgaactgccaatt
atgccacaacaaccagctcaaacagactgctgcagttctcctattctaccccgtgcaagt
catgtgatctctacagcagaggggtcgaatcgaagaacaagcattcatgaattcatgtcg
cgagataatagagcaccagtatcaatagatccttctccaggcaaggtggtaacgagcgct
cggactttacccaatatgggatctgtgcaggaactcagaagtgcacaaggcaaaactgag
gagcaacagagctcctag
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integrated database retrieval system
