Rhincodon typus (whale shark): 109929163
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Entry
109929163 CDS
T06055
Symbol
chrna1
Name
(RefSeq) acetylcholine receptor subunit alpha
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
rtp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
109929163 (chrna1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109929163 (chrna1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109929163 (chrna1)
Ion channels [BR:
rtp04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
109929163 (chrna1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF420
Claudin_2
Motif
Other DBs
NCBI-GeneID:
109929163
NCBI-ProteinID:
XP_020384571
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All DBs
Position
7:43271166..43294927
Genome browser
AA seq
461 aa
AA seq
DB search
MTSCTDPCLALTILLLSFGGQVLGSEYETQLVAKLFQNYNKVIRPVESHDQLVNVTVGLQ
LIQLINVDEVNQIVETNVRLRQQWVDVKLRWKPDDYGGVKKIRLPASDIWLPDIVLYNNA
DGEFAIVHMTKVLLEYTGKIIWNPPAIFKSYCEIIVTHFPFDQQNCSIKLGIWTYDGTRV
AIFPESDRPDLSDFMESGEWVMKDYRGWKHWVYYTCCPTTPYLDITYHFIMQRLPLYFVV
NVIIPCLLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGK
YMLFTMIFVISSIIITVIVINTHHRSPSTHTMPQWVRKVFIDTIPNIMFFSTMKRVKKEK
QEKSIFPEDIDISDISGKQAAGNITFQTPLTKNPDVKSAIEGIKYIAEHMKSDQESNNAA
DEWKYVAMVIDHILLAVFMVVCIIGTLSVFAGRLIELNQEG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgtgtactgatccgtgcttagcattgacgatccttttattgtccttcggagga
caggtgctgggttctgaatatgaaacgcagttggtggctaagttatttcaaaactataac
aaggtgattcgtccagtggagagccacgatcaattagttaacgtcacagtgggcttgcag
ctcattcagctcatcaatgtggatgaagtaaatcaaattgtggaaacaaatgtgcgcctg
agacagcaatgggttgatgtgaagcttcgatggaaaccagatgattatggtggtgttaaa
aagatcagattgcctgcttctgacatttggctcccagacattgtcctgtacaacaatgca
gatggtgaatttgccattgttcatatgacgaaggtgcttttggaatatacaggaaaaata
atctggaatcctccagcaatttttaaaagttattgtgaaatcattgtaacacatttccca
tttgaccagcaaaattgcagcattaaactgggaatctggacatatgatggaacgagagtt
gccatatttccggaaagtgatcgaccagatttgagtgatttcatggagagtggagagtgg
gtaatgaaagattatcgtggatggaaacactgggtgtattatacctgctgtccaactact
ccttacctggatatcacctatcactttatcatgcagcgcctaccactttattttgttgtg
aatgtcatcattccttgtctgctcttttcctttttaactggattagtattttacttgcca
actgattcaggtgagaagatgactttgagtatttcagttttgctgtctctgacagtgttc
cttctggttatcgttgagctaatcccttcaacttccagtgctgtgcctttaattggcaaa
tacatgctcttcacaatgatttttgtcatcagttcaatcattattactgtcatcgtaatt
aatactcatcatcgctctccaagtacacatacaatgccacaatgggttcgcaaggtgttt
attgacaccatacccaatataatgtttttttcaacaatgaaacgagtaaaaaaggaaaaa
caagagaaaagcatattccccgaggacattgatatctctgacatttctggaaaacaagca
gcaggaaacattactttccaaactcctttaacaaaaaacccagatgtcaaaagtgccatt
gagggaatcaaatatattgcagagcacatgaaatctgatcaggaatcaaacaatgctgca
gacgaatggaagtatgttgcaatggtgattgatcacattctgctggctgtcttcatggtg
gtttgtattatcggtactcttagtgtctttgctggtcgtcttattgaactcaatcaggag
ggctga
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