Rhincodon typus (whale shark): 109929452
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Entry
109929452 CDS
T06055
Symbol
gabrg2
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-2
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04080
Neuroactive ligand-receptor interaction
rtp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109929452 (gabrg2)
04082 Neuroactive ligand signaling
109929452 (gabrg2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109929452 (gabrg2)
Ion channels [BR:
rtp04040
]
Ligand-gated channels
GABA-A
109929452 (gabrg2)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
109929452
NCBI-ProteinID:
XP_020384721
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All DBs
Position
12:49994396..50108499
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AA seq
479 aa
AA seq
DB search
MKREMASRKIHLQCPIATINVSFLRKVVFWTFLIACLPSCSGKSDDEDYEDLILNKTWVL
TPKVYESDVTLILNNLLEGYDNKLRPDIGVKPTIIGTDMYINSIGPVNAINMEYTIDIFF
AQTWYDRRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGR
ILYTLRLTIEAECQLQLHNFPMDEHSCPLVFSSYGYPKDEIIYQWARYRSVIFGEPRFWR
LYQFAFLGLRNTTDLVRTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLTVVLSWVSFWI
NKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTL
HYFVSNRKPSKDKDKKKKNHLLRMFSSKAPTVDIRPGSSAVQMNNASHLQERDEEYGYEC
LDGKDCTSFFCCFDECRTGAWRQGRLHIRITKVDSYARIFFPTAFGLFNLVYWVGYLYL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagagatggcttctcgcaaaatacatctccaatgtcccatcgcgacaattaac
gtctcatttctcagaaaggtggtcttctggacatttctgatcgcgtgtcttccatcctgt
tctggaaaaagtgatgatgaagactatgaagatttgattcttaacaaaacatgggtattg
acaccaaaagtttatgaaagtgatgttactcttattttaaacaatttattggaagggtat
gacaataaactcaggcctgacataggagtgaagccaacaataattggtactgacatgtac
ataaatagcattggtccagtgaatgctatcaatatggagtataccattgacatatttttt
gcccaaacgtggtatgatagacgtctcaaatttaatagcacaatgaaggtcctcagactc
aacagcaacatggttggcaaaatatggataccagacacattctttagaaattccaagaag
gctgacgcccattggataacaactccaaatagaatgcttcggatatggaatgatggaaga
atattgtacacgctaagattgacaattgaagctgaatgccaactacaactgcataacttc
ccaatggatgagcactcatgccctttggtattttcgagttatggctaccccaaagatgaa
ataatatatcagtgggcaagatatcgttctgttatctttggagagcctcgcttttggagg
ctgtatcagtttgcgtttcttggattgagaaatacaacagatctcgtcaggactacttct
ggagattatgttgtgatgtccgtgtacttcgatcttagcagacgaatgggctacttcact
attcagacctatatcccttgcacattgactgttgttttatcctgggtatcattttggatc
aataaggatgcagtaccagccagaacatcattaggcatcacaactgtcctgactatgacg
acactgagcacgattgcacgtaaatccctgcccaaggtttcctatgtcactgctatggac
ctctttgtgtctgtttgctttatatttgtgtttgctgcactaattgaatatgggaccttg
cattattttgtcagtaatagaaagcccagcaaagacaaagacaaaaagaagaagaatcac
cttcttcggatgttttcatcaaaggcgcctactgtggatatccgccctggatcatccgct
gtccaaatgaacaatgcctcacacctgcaagagagggatgaagaatatggatacgagtgt
ctggatggcaaagactgcaccagtttcttttgctgttttgacgagtgtcgcacaggagca
tggaggcaggggagattacacatccgtatcaccaaagttgactcgtatgctcgtatcttc
ttccctacagcttttggtttgtttaacctggtctactgggtaggctacctttatctgtaa
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