Rhincodon typus (whale shark): 109929457
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Entry
109929457 CDS
T06055
Name
(RefSeq) tumor necrosis factor receptor superfamily member 6-like isoform X1
KO
K04390
tumor necrosis factor receptor superfamily member 6
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04010
MAPK signaling pathway
rtp04060
Cytokine-cytokine receptor interaction
rtp04115
p53 signaling pathway
rtp04210
Apoptosis
rtp04217
Necroptosis
rtp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109929457
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109929457
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109929457
04217 Necroptosis
109929457
04115 p53 signaling pathway
109929457
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109929457
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
rtp04050
]
109929457
04090 CD molecules [BR:
rtp04090
]
109929457
Cytokine receptors [BR:
rtp04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
109929457
CD molecules [BR:
rtp04090
]
Proteins
109929457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
DUF3377
CRIM1_C
Motif
Other DBs
NCBI-GeneID:
109929457
NCBI-ProteinID:
XP_048464854
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All DBs
Position
20:12167878..12205300
Genome browser
AA seq
372 aa
AA seq
DB search
MPLGKGSSKTKPESGLGLCATANQKMKRTCPMLLVLSLLIVTDAHQSTSEERNAVQNSLS
NANISSPVRRWPVKRRFRRNDNCPDFSSSNCNKCKPGTYLLSCSCNCEQCKDGEFTDAEN
LLDKCERCTQCQEHDGKKMKTNCTTTNDTVCSCLENFFSSTDEHQCYKCAQCNAETEEVE
QPCTETQNTVCRKKGGQSVPVAAVVIPIILVLVAIVAILYKKKKYLRCKKTSGDKPSNWI
NVCVSGKEQTKPPEVPDIELTEEHLQLMVMEIEPRMYHELGISLGHSEPKVQQIRADYHD
DIKQQGYQILYAWFQAHGKKGAFPELINTFWRMGYVTTAENIMEKIIPKSEATIDASTLD
GSENGRMADMVS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcctttagggaaagggagcagcaaaaccaaaccggagtcggggctcggtctctgcgcg
acagcgaaccagaaaatgaagcgaacgtgcccgatgttgttggtgttgtctttgctgatt
gtgacagatgcccatcaatctacctccgaggagaggaatgctgttcaaaatagtttatca
aatgccaatatttcaagtcctgtacggagatggcctgtaaaacgacgtttccgaaggaat
gataattgtccagatttttcgtcatcaaattgcaacaaatgtaagccaggtacttatctg
ttaagctgctcttgcaattgtgaacagtgtaaagacggcgaatttacagatgctgaaaat
ctcttggataaatgtgagcgatgtacgcaatgccaagagcatgatggtaagaaaatgaaa
accaattgtaccacaactaacgacacagtatgcagttgcttggaaaatttcttcagctca
accgatgaacaccaatgctacaaatgtgcacagtgcaatgcagaaactgaagaggtcgaa
caaccctgtacagaaacacagaacacagtctgcaggaagaaaggtggccaatcagtacct
gttgctgctgtggtgataccaattatactagtacttgtagcaattgttgccattttgtac
aagaaaaagaaataccttcgatgcaaaaagacgtctggtgataagccaagcaactggata
aatgtttgtgtttcaggtaaagaacagactaaaccaccagaggtaccagacattgagctt
actgaagaacatttgcaattgatggtgatggaaattgaaccgagaatgtaccacgagctt
gggataagcttagggcacagtgaacctaaggtgcagcagattcgagctgattaccatgat
gatataaagcaacagggttatcaaatactgtatgcctggttccaggctcatggaaagaaa
ggcgcattccctgaattgattaacacgttctggagaatgggatatgtcaccactgccgaa
aacattatggaaaaaattattccaaaaagtgaggctacaattgacgccagcacactggat
gggagtgaaaatggcagaatggcagatatggtgtcttag
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