Rhincodon typus (whale shark): 109929470
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Entry
109929470 CDS
T06055
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5-like
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtp03016
]
109929470
Transfer RNA biogenesis [BR:
rtp03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
109929470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_12
TPR_14
TPR_17
TPR_11
TPR_19
TPR_1
TPR_8
TPR_CcmH_CycH
ARM_TT21_N
RMD1-3
CFAP70_mid_TPR
TPR_15
TPR_9
TPR_Psidin_N
TPR_16
TPR_10
TTC22_C
ANAPC3
ARM_TT21
CNOT10_TPR
NatA_aux_su
TPR_MalT
Tlp
Motif
Other DBs
NCBI-GeneID:
109929470
NCBI-ProteinID:
XP_020384734
LinkDB
All DBs
Position
20:12628544..12648320
Genome browser
AA seq
594 aa
AA seq
DB search
MHTQLQKERPKWEKDELKNWEFEEENKNVKDEITVLSVSSPVPKPIQNLYPTTRDIQEVV
QQKQAIALGKQRDKSDAPSSSESDEGCISWHHFYNLLKPRSDTVKDLLKVKLNQLQCHFT
WAPQKENIDLDDMKYRLEDSIQAGVKYQDRSYNQLAFITCLQGNCEEAIQNLKEAEKILK
EKHQDEFEKRIIVTYGNYAWVYYHMDRLGEAQSYLDKLETVCKPFPEASQFTAMIPEVYG
EKGWSLLTTAAQYYEEAKECFKKALEKDPDNIEWNVGYATALSRLEWFSGTPESRGPMES
LKWFRRVLELDPNDSVSMVLLALKLQISRKSDEALTLVERALQKSPDLPYVLRYAAQFYR
YCNNVDKALELLERGLEISPHSTFIHHKIGQCYRTKLYRVIKNPLSKDPRNPAFQQKAEL
VNKCKYHFEKSFEKRSLTSIKGHLDFAAICLLNEEYDKAQEIYSHLLTLEVIRPENKQAI
CLAVGLFQLNHKNSESNAIQHFLEGMKVNYNSVEWNKCRENLEKIAARRLRRNPRDSEAL
GVRGFLHQLDGEKCEAIECFKKALEFDPDNDEYLSALCELRPSIEGRNNFPNEN
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcatacacagctacaaaaggagagaccaaaatgggaaaaagatgaacttaaaaattgg
gagtttgaggaagaaaacaagaatgtgaaggatgagataacagtactgtccgtttcttcc
ccagttcccaagcccatacagaatttgtatccaactacccgcgacatccaggaagtggtt
cagcaaaaacaagctatcgcccttgggaaacagagagataaaagtgatgcaccctctagc
agtgaaagcgatgagggctgtatatcctggcaccacttttacaatctcttaaaaccaaga
agtgacacagtgaaggatttgttgaaagtgaagctgaatcagcttcaatgtcacttcaca
tgggctccacagaaagaaaacattgacttggatgatatgaaatacagattagaagattcg
atacaggctggtgtgaaatatcaagacaggtcctacaaccaacttgcttttataacctgt
ctgcaaggaaactgtgaagaggcaattcagaatttaaaggaagctgaaaagattctgaag
gagaaacatcaagatgaatttgaaaaacgaatcattgtcacctatggaaactatgcctgg
gtttattatcacatggaccgactgggagaggctcagtcctacctcgataagctagagaca
gtctgtaaaccatttcctgaagcctctcagtttacagcaatgatacccgaggtttatggg
gagaagggttggtcactgttgactactgctgcccagtattatgaagaggcaaaggaatgt
tttaaaaaggccctggagaaagatcctgacaatattgagtggaacgttggctatgccact
gctctgtctcgtctggaatggttttctgggaccccagagagtcgcgggcccatggaatca
ctgaagtggtttagacgtgtgctggagcttgatcccaatgactctgtatccatggtgctg
ttggctctcaaactacaaataagtaggaaaagtgatgaagcactcactttagttgaacga
gcattgcagaagtcccctgatctcccttatgtgctccgatatgcagctcagttttacaga
tactgcaacaatgtggataaagctctggagctgttggagagaggattagaaattagccca
cactctaccttcatacatcataaaataggtcaatgttacagaaccaaattgtatcgagtg
atcaaaaatccactcagtaaagatcctcgcaatccggcatttcaacagaaagctgagctg
gtcaataaatgcaagtaccatttcgaaaaatctttcgagaaacggtcgctgacatctatt
aagggccacctcgattttgcagcaatttgcttattaaatgaagaatatgacaaagcacag
gaaatctacagccatctcctgacactggaagttattcgcccagagaacaagcaagcgata
tgtttagcggtagggttattccaactgaatcacaagaattcagaatcaaatgccatccaa
cattttctggagggaatgaaagtcaattacaactcagtggaatggaacaagtgccgtgaa
aacctggagaagatagcagcaagacgacttcgcaggaatccaagagacagtgaggccctt
ggtgttcggggattcctgcaccaactcgatggggagaagtgtgaagcaattgaatgcttc
aaaaaggctttggagtttgatcctgacaatgacgaatatttaagtgctctttgtgagtta
cgcccttccatcgagggcagaaacaactttcccaatgaaaactaa
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