Rhincodon typus (whale shark): 109929560
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Entry
109929560 CDS
T06055
Symbol
lrit3a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
109929560 (lrit3a)
Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
109929560 (lrit3a)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
LRR_4
I-set
LRR_1
Ig_2
LRR_5
fn3
LRR_14
ig
LRR_EndoS
Fn3_ELFN
COX14
LRR_9
C2-set_2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
109929560
NCBI-ProteinID:
XP_020384807
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All DBs
Position
1:complement(119934826..119958246)
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AA seq
600 aa
AA seq
DB search
MSEIPVNVPVDTVKLRVEKTVVQQLPREAFYYLVDLKYLWLTYNAINTINPQSFYNLKEL
HELRLDGNMLSTFPWDSLQEMPNLRTLDLHNNRLSTIPATAARYLRNITNLDISSNKLTT
LPSDLLDIWPAHSRYHEFEKDPMKRVILGFQDNPWFCDCRISKLIELSKTEEALVILMDP
LLTCSEPENIAGVFFQRVELQQCLKPSVMASATKLTSPVGSNVLLRCDSKGYPTPSLVWL
RGNGLPLNHAVVQESPADGIRWSIISLTGISYRDAGDYRCKAKNLAGASEVSITLTVVGT
ITTASPQRQSLLKKSSTEQKISTPANKEQKMESLTTDALFSVSTTWSTKEKILPVDEAMP
VADERKLTKLQVEKKSDKMTQQVNENKKKGLPFNTTATPEENAIIKNLRVISETAQKVSV
SWKISNYRSGTALNVLYSKYGEKDVQKVNEDPSKNKISIGGLTPNTKYTACICPKGIQPK
KEQCIVFSTEGEPNTSSHQTLLTIIGVVLGCIIGTGLLLMLCYELVKVHHKQRKRAEQEL
LKDSYVKFETLSLRAQPVRRGNDLWTRRDTESQRLLLCSRSSIDSQITFKSDSSRSEYLC
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagatccctgtcaatgttccagtggatacagttaaacttcgtgttgaaaaaact
gttgttcaacaacttccacgtgaagcattttattaccttgtggatctaaaatatctctgg
ctgacatataatgccatcaataccataaaccctcaaagcttttataatttaaaagaactc
catgaattgcgccttgatggaaacatgctgtctacctttccttgggattcactgcaggaa
atgccaaatcttcgaactcttgacttgcacaataacagactgtcaaccattcctgctact
gcagctcgatatctgagaaatataaccaatttagatatatctagtaacaaactcactaca
ctgccatctgacttgttagatatttggcctgctcactcaagatatcatgagtttgaaaaa
gatccaatgaagagagtaattctaggttttcaagataacccatggttctgtgactgcagg
atatcaaagttgattgagctttctaagacagaagaagcattagttattctcatggaccct
ctcctgacatgtagtgaacctgaaaatattgcaggagttttcttccagagagttgagctt
caacagtgcctcaaaccatcagtcatggcttcagcaacaaaacttacgtcacctgttgga
agtaatgtcttgctccgctgtgattcaaaaggatatccgaccccatcgcttgtctggctc
agggggaatggcttaccacttaaccatgcagttgtccaagaatcaccagcagatggaatc
cgatggtcaataataagtttgacaggaatttcctatagggatgctggagactatagatgt
aaagcgaaaaatctagctggagcatcggaagtctctattactctcactgttgtaggcacc
attactacagcctctcctcagaggcagagccttttgaagaagtcgagtacagaacaaaag
atttcaactccagcaaataaggagcaaaaaatggaaagtctgacaacagatgcgctcttc
tctgtctccaccacatggtcaacaaaggaaaagattcttcccgttgatgaagccatgccg
gtggcagatgaaaggaagctcaccaagttgcaagtagagaaaaaatcagacaaaatgact
caacaagtcaatgagaacaagaaaaaaggcctaccattcaatacaacggcaacaccagaa
gaaaatgcaattattaaaaacctgagagttatcagtgagacagcccagaaagtttcagta
agctggaaaatttcaaattatagaagtggcactgccttaaatgtgctgtactcaaagtat
ggtgagaaagatgttcagaaggtcaacgaggaccctagcaaaaataaaatatcaataggt
ggattgacgccaaatacaaaatatacagcatgcatatgtccgaaaggcatccaacctaag
aaagaacaatgtatagttttttcaacagaaggagaacccaacacaagtagccatcaaacc
ctattgacgattattggtgttgtcctagggtgtattattggaacaggactccttttgatg
ctgtgttatgagctggtcaaagttcatcacaagcagagaaaaagagcagagcaggagcta
ctcaaagattcttatgtgaaatttgaaacactgtcactcagagcacagccagtaaggaga
gggaatgatttgtggactcggcgtgatactgaatcccaaaggctactgttgtgctcaaga
tcgagcatagattcacagatcaccttcaagagtgacagttctaggtctgagtatctttgc
tga
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