KEGG   Rhincodon typus (whale shark): 109929747
Entry
109929747         CDS       T06055                                 
Name
(RefSeq) claudin-1
  KO
K06087  claudin
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp03272  Virion - Hepatitis viruses
rtp04382  Cornified envelope formation
rtp04514  Cell adhesion molecules
rtp04530  Tight junction
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    109929747
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    109929747
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    109929747
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    109929747
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rtp03037]
    109929747
   04147 Exosome [BR:rtp04147]
    109929747
   04515 Cell adhesion molecules [BR:rtp04515]
    109929747
Cilium and associated proteins [BR:rtp03037]
 Other cilia and associated proteins
  Stereociliary proteins
   109929747
Exosome [BR:rtp04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   109929747
  Exosomal proteins of colorectal cancer cells
   109929747
Cell adhesion molecules [BR:rtp04515]
 Immunoglobulin superfamily
  L1 family
   109929747
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 DUF3112 DUF7702 DUF5692 Amastin
Other DBs
NCBI-GeneID: 109929747
NCBI-ProteinID: XP_020384912
LinkDB
Position
13:complement(20786428..20826580)
AA seq 213 aa
MANSGLQILGFALAFFGWIGIIASTALPQWKTSSYAGENIVTAQAIYEGLWMSCVSQSTG
QVQCKVYDSMLKLHSTLQATRALMIIAILLGTLAILIAATGMKCTTCFADDKTKKGQVAT
VGGVMFIISGLATLVATAWYGNNITREFYNPLTPTNNRYEFGQALFIGWAAAALCLLGGA
FLCCSCSKGTGGSYPSNAYPRSQGDPSTARNYV
NT seq 642 nt   +upstreamnt  +downstreamnt
atggccaactcgggtctccagatcctgggctttgccctggcttttttcggctggatcgga
atcattgctagcaccgctctgccccagtggaaaacctcgtcttacgccggggagaacatc
gtgacggcgcaggccatctatgaaggactctggatgtcctgtgtgtctcagagtaccggg
caggtccagtgtaaagtctacgactctatgctgaaactgcacagtacgctacaggctact
cgagcactgatgatcatcgcaatactactgggaaccctagcaatcctgattgctgcaacg
ggaatgaaatgcacaacatgttttgctgatgataaaacgaagaagggccaagtggctacc
gttgggggagtcatgttcattatctcaggtcttgctacattggttgctacagcctggtat
ggaaacaacattactagagagttctacaaccccttaacaccaaccaacaacaggtatgag
tttggccaagctctgttcataggatgggctgctgctgccctctgtctactcggtggggcc
ttcctgtgctgctcttgctccaaaggtactggaggatcctacccaagcaatgcctaccca
cgatcacaaggtgatccttctactgcaaggaactacgtgtga

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