Rhincodon typus (whale shark): 109929804
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Entry
109929804 CDS
T06055
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109929804 (sntb1)
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Paralog
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Motif
Pfam:
Syntrophin_4th
PH_17
PH
PDZ
SOS1_NGEF_PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
109929804
NCBI-ProteinID:
XP_048452038
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Position
4:complement(35778396..35891726)
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AA seq
521 aa
AA seq
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MALAGRVQRSGLLEVLVRDSWHRVLATLNQENLILSCEQPGHTASWNGLTNGAGSQSPQA
ASRSPKSTAVRNAFTELPEHIPETISNKKRSVRVIKQEVGGLGISIKGGKENKMPILISK
IFKGLAADKTEALYVGDAILSVNAVDLRDATHDEAVQVLKRAGKEVLLEVKYMREATPYI
RKTSPVSELGWETLPPESPRLGSAAIESHATLPFSLPSDSKDSKSIPLKMCYVTRSFSTP
DPENRQFELHSPDCKYTVVLRCKDPSTAQAWFNTIQSNTSNLTSKVIAEVKDQLGRTGIA
GSREIRHIGWLAEKTIGENEKRQWKPVLVVLTEKDMVIYPSMPRMKESWSSPAHTCPLLA
TRLVHSGVGRDSPQPGVELSFATRTGTRQGIETHLFRVETNSSLSNWTRQIVQGCHNAAE
LTKEVTTTCTYRTQQCLLTVHYTNGFSILKDGQEGSMPKLIWQYPFEKLRNSSDDGVRML
FLDFGGRDGEIQLDLHSCPKPIVFVIHSFLSAKIARLGLLA
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcgttagccggcagagtacagagaagtggactgttagaagttttggtcagggacagc
tggcatcgtgtgctggccaccctgaatcaggagaatctgatcctgagctgtgagcagcct
gggcacactgcctcctggaatggactcaccaacggagcgggctcacaaagtccccaagcc
gcgtcccgcagccccaaatccacggcggtacgcaacgccttcaccgagctacctgaacac
atccccgaaactatcagcaacaagaaacggagcgttagggtcatcaagcaagaggttggg
ggcctagggatcagcatcaagggaggcaaggagaacaagatgccaattctgatctcgaag
atcttcaaaggtttggcagctgacaagactgaagctctatatgtgggggatgctatctta
tcagtgaatgctgtggacctgagggatgcaacacatgatgaggcagtgcaagtgctgaag
agagctggcaaagaggtgcttctagaggtgaagtacatgagagaagctacaccttacatc
cggaagacctctccggtttcagaacttggatgggaaactctccctccagagtctcctagg
ctcggatctgcggccatagaatctcacgcaacccttccattctccttaccaagcgactcc
aaagattcaaagagcattccgctgaagatgtgttatgtcacgcgaagtttcagtacgcca
gaccctgaaaacagacaatttgaactgcattctcctgattgcaaatacaccgtagtcctg
aggtgtaaagatcccagcacagcccaagcctggttcaacaccattcaatctaataccagt
aacctgaccagcaaggtcatcgcagaagtcaaagatcaactgggaagaacagggatagct
gggagtcgagagattcgccacataggctggctcgcagaaaagacaataggagagaatgaa
aagagacaatggaagcctgttctggtagtgctgactgaaaaggacatggtgatttatccc
agcatgcctcgcatgaaggaatcctggtccagtcctgctcacacttgcccattgcttgct
accagattggttcattctggtgtgggcagggattcaccacaaccaggtgtggaactgtct
tttgccactcgcactggaacacgccaaggcatcgagactcacctcttccgtgtcgagacc
aactccagtctgtccaactggaccaggcaaattgtacaaggctgccacaacgcagccgag
ctaactaaggaagtcacaaccacgtgtacatacaggacccagcagtgtcttctgaccgtt
cattatacaaacggattttctatcttgaaagatggacaagaaggaagtatgccaaagctg
atttggcaatatcccttcgagaaattgagaaactcctctgatgatggggtgagaatgctc
tttctagactttggcggaagagatggggaaattcagttggatcttcactcatgcccgaaa
cctatcgtttttgtcattcattcgttcctttcagcaaagattgcgcgacttggcttgcta
gcctga
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