Rhincodon typus (whale shark): 109930018
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Entry
109930018 CDS
T06055
Symbol
rpgrip1l
Name
(RefSeq) protein fantom isoform X1
KO
K16550
protein fantom
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtp01009
]
109930018 (rpgrip1l)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rtp03037
]
109930018 (rpgrip1l)
Protein phosphatases and associated proteins [BR:
rtp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109930018 (rpgrip1l)
Cilium and associated proteins [BR:
rtp03037
]
Primary cilia and associated proteins
MKS complex
109930018 (rpgrip1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-C2_1
RPGR1_C
C2
ACBP4_C
Motif
Other DBs
NCBI-GeneID:
109930018
NCBI-ProteinID:
XP_048461844
LinkDB
All DBs
Position
15:complement(40433543..40611263)
Genome browser
AA seq
1253 aa
AA seq
DB search
MLGLSDETAGDLPVKDVGMNLAGIGALQESSGTQNTRARQAVSRICREELEDRFLRLHDE
NLLLKQHARKQEDKIKRMATKLIRLVNDKKRAEMESGGTKRIGRDIEMEEMIEELQERVC
ELEKQNDGLKNRLVATKQQLQVQGRRNTPYSYVQSRVNTGLRKVHEVAFTQENLKKGIRV
QDPELTTRSPHPTLPRYGHSLLEDARAEVRNLENCIESQKMQMEEMEQTIEILREQIRKK
DKEYEESLLHLREHQATGQRTAIRDNVEMIKLQKHLVEKGAALTVLEGKYLQIQENQKTM
KASHDALMNKVDELNAQLKEERSKCLFLENQLHLTSLSQKTIVELQERVSDLQRERDLLK
ENYDKLYNSAFDMTHEQEWKLKEQQLKLQIAQLETALKSDLADKNDILDKIKLEREKNER
LSQENKELQLHYLEYKQQLDELKERMKFFTKESDIDVTELSEALMLIKVRKHEKNGHIEF
LEKAEDDIKKDLEYSVRELQATHAETVQELEKTRNMLLMQYKINKDYQSEVDTVTQKMED
NNREYEIKLEQYAQLLDIRANRIRKLEAQLKDIAYGTKQFKFKTEITTDDEVDEIDETVH
LERGENLFEIQISKVIFSPEAVKTFGEQEPATFCTYAFYDYELQSTPVIHGLQPVFDFTS
QYVVRVDDVFLQYLQKNTVKLEVQLAYGTDYETIATCQLRMHEILEKNGRIFGTAVLVGG
RQDSENYGTVEYWFRLRVPMAQAIRLYKERTKALGYIASSRHSDDQMQQAHTAALTDGNL
NEVHIVIKSCDNLQARRKNIQPNPYAVYKFFDFADHDTAIIPNSNNPQFDDHMRFPVPIN
TELDRYLKSESLIVYVFDDAEPDDTFYLGKAKVPLISLAHNKYVIGTFELTNFEGQVNGT
VNVELKWMTSYLPSNESIMRVDQSEVIPKEEPETLPVKEIFDESSPAVSEDPVLKPRKQI
YNREERRVSWADMEFSESLLTKGAKRSDVHMADVTSKTNEAKIITTEPEPINQTQVVTGA
ELENVQASEYDEESSDFSADVTSTISGITEKLDDTEPGQVDDDAEESITDSDDCIVPGRL
STHIKQPSEKIRIEIVSLTLNEDAQILKDETTQRLFVEYRFYNLPAEETPMSLPKPYNGQ
WIYYNHSNVIYVDQENNQQRRQFLWSVLQGLELNLESIKFTVVSDPPEDEQDLECEDVGF
AHVNLRELFQKEEDIIEQDIDIVDSQDSMLVIGKLKVTVEALEALLSVYEENK
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgttgggcctatctgatgagacagcaggagacctccctgtgaaggatgtaggcatgaac
ctggctggaattggtgccttgcaagaatcatctggtacacagaatactagagctcgtcaa
gccgtgtctcgtatttgccgtgaagagctggaagatcgctttcttcggctacatgatgaa
aaccttttactcaaacaacatgcacgaaaacaagaagataaaattaaaaggatggctact
aagctaattaggcttgtaaatgataagaagagggctgagatggagagtggcggcaccaag
cggataggcagggacattgagatggaagagatgattgaggaactgcaggaaagagtttgt
gaactggagaagcagaatgatgggctgaagaatcgattggtagcgactaaacagcagcta
caagtgcaaggccgtagaaacacaccatacagttatgtacaatcacgtgtaaatactggc
ctcagaaaagttcatgaagttgcctttacacaagaaaatcttaaaaaaggaattagagtt
caagatccagagctgacaacaagatctccccaccctacgcttcccagatatggacatagc
ttacttgaagatgccagggcagaagtgcgaaatttggagaattgcattgagtcccagaag
atgcagatggaagagatggaacagactattgagatattgagagaacagattaggaagaag
gataaagaatatgaggagtcccttctgcatctcagagagcaccaggcaacgggacagagg
acagcaatcagagacaatgtggagatgataaagttacagaaacaccttgtcgaaaaagga
gctgcacttaccgtcttggaaggaaaatatttgcaaattcaggagaaccagaaaaccatg
aaagccagtcatgatgctttaatgaataaagtggatgaactgaatgcacagctgaaagaa
gaacgttctaagtgcctttttcttgaaaatcaacttcacttaacttcattgtctcaaaaa
acaattgtagagctacaagagagagtcagtgatttacaaagggaaagagatcttttgaag
gaaaattatgacaaattatacaacagtgcttttgacatgacccacgaacaagagtggaag
ttgaaggaacagcagctgaaactacagattgcacagctcgagaccgcactaaaatctgac
ctggctgacaaaaatgacatcttggacaaaataaaactggaaagagaaaaaaatgaacgc
ctctcccaggagaacaaagagcttcagctgcactatcttgaatacaagcaacagctggat
gaactaaaagagcgtatgaagttcttcaccaaagagagtgatattgatgtgactgaactc
agcgaagcactgatgctcataaaggttcgtaaacacgagaaaaatggacatattgaattc
ctggagaaagcagaggacgacattaagaaagatttggagtactctgtgcgagagcttcag
gcaacacatgcagagactgttcaagaacttgaaaaaacaagaaatatgttacttatgcag
tacaaaattaataaagattatcagagtgaagttgatactgtgacacagaagatggaagat
aataaccgagaatacgagattaaactggaacaatatgcacagctgcttgacattagggcc
aatcgaatcagaaaacttgaagcccagctcaaagacatagcctatggcaccaaacaattc
aaattcaaaacagaaataacaaccgatgatgaagttgatgaaattgatgaaactgtccat
ttagagcgtggagaaaatttatttgagatccagatcagcaaagtgatcttctctcctgaa
gctgttaagacttttggagagcaagaacctgctactttttgtacctatgcattctatgac
tatgaactccagtccactcctgtaatacatggactacagccagtatttgacttcacatct
cagtacgttgtccgagtagacgacgtcttcctacagtatttacagaaaaacacagtaaaa
ctagaggtacaactagcatatggcacagactatgaaacaattgcaacatgtcagttgaga
atgcatgaaatccttgaaaagaatggcagaatttttggcactgcagttttggttggtggc
agacaagattctgaaaattatggaacagtggaatattggttccggcttcgtgtgccaatg
gctcaggctattcggctatacaaagaacgaacaaaagcactaggatatatagcttccagt
cgtcattcagatgatcaaatgcaacaggcacacactgcagctctgacagatggtaatctg
aatgaagttcatattgttataaaatcctgtgacaatctgcaagccagaaggaagaatatc
cagccaaatccttatgctgtctataagttctttgattttgcagaccatgatacagccatt
attccaaacagcaacaacccacagtttgatgatcacatgagatttcctgtaccaattaat
acagagcttgatcgatatttaaagtcagaatcattaattgtttatgtgttcgatgatgca
gaacctgatgatactttttacctcggaaaagccaaagttccccttatttcattagctcac
aacaagtatgttataggaacatttgaacttacgaattttgaaggacaagtcaatggcaca
gtaaatgttgaattaaaatggatgacttcatacttgccatcgaatgaatccataatgaga
gttgatcaaagtgaggtaatcccaaaggaagaaccagaaacattgccagtaaaagagata
ttcgatgaatcttcgcctgctgtatctgaggatccagttttgaaacctagaaagcaaata
tataatcgagaagaaagaagagtatcgtgggcagatatggagttttctgagagtctacta
actaaaggagcaaaacgttctgatgttcatatggctgatgttacaagcaagacaaatgag
gcaaaaattatcacaacagagcctgaaccaattaatcagacacaggttgtcacaggtgca
gagttggaaaatgtacaggcatcggaatatgatgaggagagctcagatttttctgcagac
gtgacttccactatttctggaataactgaaaaactagatgacacagagcctggccaagtt
gatgatgatgccgaggaatcaataactgacagtgatgattgtattgtcccaggccggctg
tcaacacacataaagcagccatcagaaaagatccggattgagattgtatctctcacactg
aatgaagatgcgcaaatcctgaaggatgaaactactcaacgattgtttgttgaatatagg
ttctacaatttgccagctgaggaaacaccaatgtcccttccaaagccatacaatggacaa
tggatttattacaatcacagcaatgtgatctatgtcgatcaagaaaataaccagcagagg
aggcagttcctttggtcagtacttcagggattggagttaaacctcgagagtataaaattt
acagtagtcagtgatccacctgaagatgagcaagacttggagtgtgaagatgtcggcttt
gcacatgttaatctaagagagcttttccaaaaggaagaggacattattgaacaagacatt
gacattgttgattcacaggacagcatgttggtgattgggaaattaaaagtgacggtggag
gcattggaggcactgctttcagtctatgaggagaacaaataa
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