Rhincodon typus (whale shark): 109930023
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Entry
109930023 CDS
T06055
Symbol
myo1d
Name
(RefSeq) unconventional myosin-Id
KO
K10356
myosin I
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
109930023 (myo1d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtp01009
]
109930023 (myo1d)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109930023 (myo1d)
03036 Chromosome and associated proteins [BR:
rtp03036
]
109930023 (myo1d)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109930023 (myo1d)
04147 Exosome [BR:
rtp04147
]
109930023 (myo1d)
Protein phosphatases and associated proteins [BR:
rtp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109930023 (myo1d)
Membrane trafficking [BR:
rtp04131
]
Endocytosis
Phagocytosis
Others
109930023 (myo1d)
Others
Actin-binding proteins
Myosins
109930023 (myo1d)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
109930023 (myo1d)
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
109930023 (myo1d)
Exosome [BR:
rtp04147
]
Exosomal proteins
Proteins found in most exosomes
109930023 (myo1d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
nSTAND3
AAA_18
AAA_22
Zeta_toxin
Sigma54_activat
AAA_16
IQ
Motif
Other DBs
NCBI-GeneID:
109930023
NCBI-ProteinID:
XP_048470676
LinkDB
All DBs
Position
30:complement(7753412..8173489)
Genome browser
AA seq
1006 aa
AA seq
DB search
MAEQESLEFGKADFVLLDTVSMSEFMANLKLRFEKGKIYTYIGEVVVSINPYRPMNIYGK
DTIEQYKGRELYERPPHLFAIADATYKAMKRRSRDTCIVISGESGAGKTEASKYIMQFIA
AITNPSQRQEVERVKNMLLKSNCVLEAFGNAKTNRNDNSSRFGKYMDINFDFKGDPIGGH
INNYLLEKSRVIVQQRGERNFHSFYQLLLGGPEKLLRTLHIQKDPTAYNFIKGGGVVKSA
INDAAEFKAVADAMKVIGFTAEEIQTVYKILATILHLGNLKFAMDGDSVFIENSKLVSVI
AELLSTKSDFVEKALLYRTVATGRDVIDKQHTDQEASYGRDAFAKAIYDRLFCWIVNRIN
DIIEVKNYDAKIHGKNTVIGVLDIYGFEIFDNNSLEQFCINYCNEKLQQLFIQLVLKQEQ
EEYQREGIPWRHIDYFNNQIIVDLVEQQHKGIISILDDACVNVGKVTDKMFLDALNTKLQ
KHAHYSSRKLCATDKTLDFDRDFRIKHYAGHVVYSVIGFIDKNKDTLFQDFKRLMYNSSN
PVLKNMWPEGKLSITEVTKRPLTAATLFKSSMIALVENLASKEPYYVRCIKPNEQKSPLL
FDDQRCQHQVEYLGLMENVRVRRAGFAYRQSYDRFLQRYKMISEFTWPNHDMRSDQEAVK
KLVECCGFQHDVAYGKTKLFIRTPRTLFTLEDRRTQMIERIVLFLQKVWRGTIARIHYKR
TRAAYIIIKHYRKYKVKSYIWEVGRRFQNVGSMKDYGKHVKWPTPPKVLRKFEDTLQSVY
QRWRAYQLIKSIPPADLLQVRAKVAAVENLKGQRGDLGLQRSWEGNYLATKRDNPQMTPA
FSARANELKRKDKYMNTLFSSHVRKINRFNKSEDRAIFITDRHLYKLDPLKQYQVMKTIP
LYNVTGVSVSTGKDQLVVFHTKDNKDLIVCLDKMQPANENRIGELVGVVANHFRSEKRHF
QVKVCDPIQCSMHGKKCTIAVETKINQSQPDFTKTRSGYVLSWPGN
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcaggaaagcctagagttcgggaaggcagactttgtcctcctggacaccgtc
agcatgtcagaattcatggcaaacctgaaactgaggtttgagaagggcaaaatttatact
tacattggtgaagtggtggtttccattaacccttatcgtcctatgaatatctatggaaag
gacaccattgaacaatacaaggggcgtgaactatatgagagaccacctcacctattcgca
attgcagatgcaacatacaaagccatgaagcggaggtcaagggacacctgtattgtcata
tcaggggagagtggtgctggcaaaacagaggctagtaaatacatcatgcagttcattgcg
gctattacgaatcccagccaacgtcaggaggtggaaagggtcaagaatatgttgttaaag
tcaaattgtgtactggaagcctttggaaatgcaaaaaccaaccgtaatgacaattccagt
cgattcggaaagtacatggacattaattttgactttaaaggtgacccaatagggggccac
atcaataactatctcttggaaaaatctcgtgttatagtgcaacagcgaggagaacgaaac
ttccactctttttaccagttattgttgggtggtcctgagaaactgctacgaactttgcac
attcagaaagatccaaccgcctacaacttcatcaagggtggaggagtagtgaagtctgct
ataaacgatgctgcagaatttaaagctgtcgcagatgccatgaaagtgattggtttcact
gctgaagaaattcagacggtctataaaattctggccactattctgcacctgggaaacttg
aagtttgcaatggatggtgactcggttttcattgaaaacagtaaattggtgtccgtgatt
gcagagctgctttcgacaaaaagtgacttcgtggagaaggccttgttgtatcggactgta
gctacaggccgggatgtgattgacaaacaacacacagaccaggaggcaagctatggaagg
gatgcatttgccaaggcaatatatgatcggcttttctgctggattgtcaaccgaattaat
gacattattgaagttaagaattatgatgccaaaatccatgggaagaacacagttattggt
gtcttggacatctatggctttgagatctttgacaacaacagtttggaacagttttgtatt
aactactgcaatgagaaactgcaacagctcttcattcagctcgtcctgaagcaggaacag
gaagagtatcagcgtgaaggtatcccctggagacatattgactactttaacaatcagatc
attgtggatttggtggagcagcagcacaagggtatcatttcaattctggacgatgcctgt
gtaaatgttgggaaagtcactgataagatgttcttggatgctttgaacaccaaactacaa
aaacatgcacattattccagccggaagctttgtgcaactgataaaacactggactttgat
cgagattttcgcattaagcactatgctgggcatgttgtatattccgtaattggcttcatt
gacaagaacaaggatactttattccaggacttcaaacggctaatgtacaacagctcaaat
cctgtgctgaagaatatgtggccggaggggaagctcagcatcacagaagtgactaaacgg
cctttgactgctgccactttgttcaaatcctccatgattgcattggtagaaaacttggca
tcaaaagagccctattatgtccgttgtatcaagcccaatgagcagaaatctccactgctg
tttgatgatcagcgctgtcagcaccaagttgaatatttaggtttaatggagaatgttcgt
gtccgaagggcagggtttgcttatcgacagtcctacgatcggtttcttcagaggtataag
atgatttcagagttcacatggccaaatcatgacatgcgatctgatcaagaggctgtgaag
aagctagtagagtgctgcgggtttcagcatgatgtggcttatgggaagactaagctcttc
attcggactccaagaacattgttcactctggaggatcggcggacacagatgattgaaagg
atcgtccttttcctgcagaaggtctggaggggtaccatagctcgaattcattacaaacgc
acaagagctgcttacattattataaaacactacagaaagtacaaagtgaagtcctatatc
tgggaggtgggcagacgtttccagaacgttggaagcatgaaggattatgggaaacacgtg
aaatggccgactccacccaaggtcctgcgaaaatttgaggacactttgcaatctgtttat
caaaggtggagagcatatcagctgattaagagtatcccacctgctgacttgctgcaggtc
agagcaaaggttgcagctgtggagaacctgaagggtcagcggggtgacctgggcctgcag
agaagctgggagggcaattacctggcaactaaacgggataacccacagatgacacctgcc
ttctctgcaagagccaatgagctgaagcgaaaagacaaatacatgaacacactcttttcc
agtcatgtacggaagataaatcgatttaataaatctgaggaccgtgccattttcatcact
gaccggcatctgtacaagttggatcctctgaagcagtatcaagtgatgaagactattcct
ttgtataatgttactggagtgagcgtatcaacaggaaaggatcagcttgttgtgttccac
accaaggataataaagacctcattgtgtgccttgataaaatgcagccagccaatgagaac
cgcatcggcgagcttgtgggtgttgtggccaatcatttcagaagtgagaagaggcacttc
caagtgaaggtgtgtgaccccattcaatgctccatgcatgggaagaagtgtaccatcgcc
gtggagaccaagatcaaccagtcacagcctgacttcaccaagacacgctcaggatatgtt
ctctcatggcctgggaactag
DBGET
integrated database retrieval system
