Rhincodon typus (whale shark): 109930170
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Entry
109930170 CDS
T06055
Symbol
chad
Name
(RefSeq) chondroadherin
KO
K06248
chondroadherin
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04510
Focal adhesion
rtp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109930170 (chad)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109930170 (chad)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rtp00535
]
109930170 (chad)
Proteoglycans [BR:
rtp00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
109930170 (chad)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRR_LRWD1
LRRNT
LRR_R13L1-DRL21
LRRCT
Motif
Other DBs
NCBI-GeneID:
109930170
NCBI-ProteinID:
XP_020385308
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All DBs
Position
23:28624946..28648400
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AA seq
357 aa
AA seq
DB search
MHHLSWLFLAPLLALATAAPRCPSGCHCLGDLLHVVCENRGLKKIPRVPNKVRLLSLQQN
NYPTLPSNGFSSMKGLVSLHLQDCRIREISPNAFRGLKKLVYLYLSNNEINTIRPGAFQD
LSQLTYLYMDNNRISELAKGLLSPLKSLFLLQLSNNRMHQIKAGSFAGAKELRWLHLSGN
DMTTILPGALDDVENLATLHLDKNKLNSFPAAALSKLRVVEELKLSYNSIRTIPDNAFRS
FGRYVERMWLNNMGLERFSDGAFNGVTGLSALHLNDNKLESLPSNLVLTKMKNMTLSNNP
WHCSCSLAAVRRWMDTSRIRPDGVCASPSQYRGQQIRETSAFRTCPRRAKRNKKNAL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacctcagctggctcttcctggccccgctattagccctggcgacagccgctccc
cgctgtcccagtggctgccactgtctgggggacctgctccacgtggtgtgtgagaacagg
gggctgaagaaaatcccaagagttcccaacaaggtccgtctcctgagtctgcagcagaac
aactaccccaccctcccttccaacggcttcagctcaatgaagggcctcgtttcactccac
ctccaggattgtcgcatacgagagatctcccctaacgctttccgcggactcaagaagctc
gtctatctgtacttgtccaacaatgagattaacaccatcaggccaggcgccttccaggac
ctctcacaattgacctacctctacatggacaacaaccgaatcagtgagctcgccaagggt
ctgctgagcccgctcaagagcttgttcctgctgcagctctccaacaacaggatgcaccag
atcaaagccggtagcttcgctggcgctaaggaactgcggtggctccatctcagcggtaat
gacatgaccaccatcctgcccggcgccctggatgatgttgagaacttggcgactcttcat
ctggacaagaacaagctgaacagcttcccggcggcggccctcagcaagctccgggtggtc
gaggaactgaaactctcctacaactccatcaggaccatccctgacaacgcattccgctcg
tttgggagatacgtcgagcgcatgtggctgaacaacatggggctggagaggttttcagat
ggagcattcaatggcgtcaccggcctttcagcccttcatctgaatgacaacaaattggaa
tctctaccttcaaatcttgtcttgaccaaaatgaagaacatgactctctccaacaatccc
tggcattgttcctgctcactggctgcagtacgaagatggatggataccagcaggattcgt
ccagatggcgtctgtgcttctccaagtcaataccgtggtcagcagatccgggaaacctct
gccttcagaacttgtccaagacgtgcaaagcgcaacaagaagaatgcactctga
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