KEGG   Rhincodon typus (whale shark): 109930230
Entry
109930230         CDS       T06055                                 
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109930230 (exosc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rtp03019]
    109930230 (exosc2)
Messenger RNA biogenesis [BR:rtp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     109930230 (exosc2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     109930230 (exosc2)
SSDB
Motif
Pfam: KH_6 S1_RRP4
Other DBs
NCBI-GeneID: 109930230
NCBI-ProteinID: XP_020385348
LinkDB
Position
28:complement(39017933..39021966)
AA seq 198 aa
MLCVGYHSACPNISCLPYITFVSLQRRRSAEDELMMRDYLQEGDLISAEVQAVFADGALS
LHTRSLKYGKLGQGTLVQVSPSLVKRRKTHFHNLPCGAAIILGNNGYIWIYPITEQKDDE
AGGFVTNLEPVPVTDREVISRLRNCIIALNIHKMLLYDTSVLYCYEASMHQQIKDILKPE
IMEEIVMETRQRLIDQEG
NT seq 597 nt   +upstreamnt  +downstreamnt
atgctgtgtgtgggttatcacagtgcttgtccaaatatttcttgtctcccttacataact
tttgtctccttacagagaagaaggtctgcagaggatgaactgatgatgagggattacctg
caagaaggagatttgatcagtgcagaggtacaggctgtgtttgcagatggtgctctgtcc
ttgcacaccaggagtctgaagtatggcaagctgggccagggaacattggtccaagtatcc
ccttcacttgtaaaacgccgcaagactcattttcataacctgccctgtggagctgccatc
atccttgggaataatggctacatctggatttatccaattactgaacagaaggacgatgaa
gcaggaggatttgtgactaacttggagccagttcctgtaacagacagagaggtgatctca
cgactccgcaactgcatcattgccctgaatattcacaagatgttgctgtatgataccagt
gttctgtattgctatgaagcttcaatgcatcaacagatcaaagatattctgaagccggaa
ataatggaagaaatagtgatggagacaagacaacgtttaattgatcaggaaggataa

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