Rhincodon typus (whale shark): 109930230
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Entry
109930230 CDS
T06055
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109930230 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109930230 (exosc2)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109930230 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
109930230 (exosc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_6
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
109930230
NCBI-ProteinID:
XP_020385348
LinkDB
All DBs
Position
28:complement(39017933..39021966)
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AA seq
198 aa
AA seq
DB search
MLCVGYHSACPNISCLPYITFVSLQRRRSAEDELMMRDYLQEGDLISAEVQAVFADGALS
LHTRSLKYGKLGQGTLVQVSPSLVKRRKTHFHNLPCGAAIILGNNGYIWIYPITEQKDDE
AGGFVTNLEPVPVTDREVISRLRNCIIALNIHKMLLYDTSVLYCYEASMHQQIKDILKPE
IMEEIVMETRQRLIDQEG
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtgtgggttatcacagtgcttgtccaaatatttcttgtctcccttacataact
tttgtctccttacagagaagaaggtctgcagaggatgaactgatgatgagggattacctg
caagaaggagatttgatcagtgcagaggtacaggctgtgtttgcagatggtgctctgtcc
ttgcacaccaggagtctgaagtatggcaagctgggccagggaacattggtccaagtatcc
ccttcacttgtaaaacgccgcaagactcattttcataacctgccctgtggagctgccatc
atccttgggaataatggctacatctggatttatccaattactgaacagaaggacgatgaa
gcaggaggatttgtgactaacttggagccagttcctgtaacagacagagaggtgatctca
cgactccgcaactgcatcattgccctgaatattcacaagatgttgctgtatgataccagt
gttctgtattgctatgaagcttcaatgcatcaacagatcaaagatattctgaagccggaa
ataatggaagaaatagtgatggagacaagacaacgtttaattgatcaggaaggataa
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integrated database retrieval system