Rhincodon typus (whale shark): 109930307
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Entry
109930307 CDS
T06055
Symbol
aatf
Name
(RefSeq) protein AATF isoform X1
KO
K14782
protein AATF/BFR2
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtp03009
]
109930307 (aatf)
Ribosome biogenesis [BR:
rtp03009
]
Eukaryotic type
90S particles
Other 90S particles
109930307 (aatf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AATF-Che1
TRAUB
Motif
Other DBs
NCBI-GeneID:
109930307
NCBI-ProteinID:
XP_048468523
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All DBs
Position
26:complement(18911365..19037234)
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AA seq
541 aa
AA seq
DB search
MATSISRQLEDLLNPLPTFKDPEDEHDEATIAKVIDRFDEGEDEWTFDSKLRKCASVLLS
DSDKRYAGQATSRKALQEETGQNSFPGSSDEEEEDIVEDLESSEDNEEEETNNDSLRNTI
KDFKKFTEGMDDIGEGDSELEEVEEEEEEEKEGHDDRNHKDVEKDDVTVMKFSKEKVAEE
VEKGQSVKNQIALWDQILEGRIRLQKAVVTANQLPQPNSLPTFKKEGGPEFSTALNDSCK
ALKALLRSLVELQDELLFQYQGTQHFVSGKKAEPDSEEIPSDEEIEDVQKRKRPQKRKFK
VNEYPDFMAKRFADLKTFRNSTLQKWHDKTRLASGKIGKGFSAFERSILTQIEQIMMDKE
RLIRRTQTKRSLYKILGKVEEDSQQVPESVPGEMEVVPQGKSNVHLKDIDEEIFDDNDFY
HQLLRELIERKTTAIDSNDQIAMGRQWLAIQKLRSRIKKKVDTKASKGRKVRYHVHSKLV
SFMAPIDHSTMNDDARRNTVQTWLSFKEDPRNIEHNIEHQALKNGFGLDFLVRSLKNANH
N
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtctatatccaggcagttggaggacctgttaaaccctttaccgacctttaaa
gacccggaggacgagcacgatgaagcaactatcgctaaagtcattgacagattcgacgaa
ggggaggatgagtggacatttgacagtaaactgcggaagtgtgcctcagttttgctgtct
gattcagacaagaggtatgctgggcaggcaacctctcgaaaggcactgcaggaagaaact
ggacagaactcttttcctggctcctcagatgaagaggaagaagacatcgttgaggacttg
gaaagcagtgaagataatgaagaagaggagaccaacaatgattcgttacgtaatacaatt
aaggattttaagaaattcacagaaggaatggatgatattggagaaggtgatagtgaattg
gaagaagtagaggaggaggaggaggaggaaaaagaaggtcacgatgacagaaatcataaa
gatgtggagaaggacgatgttacagtaatgaagttctccaaggaaaaagtagctgaagaa
gtggagaaggggcaatcagtaaaaaaccaaatagcattgtgggatcaaatacttgaaggg
cgaatccgactacagaaagctgttgtgactgccaatcagcttccacagccaaattcctta
cctactttcaaaaaggaaggtggaccagaattttcaactgctttgaatgacagttgcaaa
gcactgaaagcactcctgaggtcattagttgagcttcaggatgaactccttttccagtac
caaggcacacaacactttgtcagtggcaagaaggcagaaccagacagtgaagagattccc
agtgatgaagaaattgaggatgtgcagaagaggaaaagaccacagaaaaggaagtttaaa
gtgaatgagtacccagacttcatggccaagcggtttgctgacctcaaaacatttcgtaat
agtacattgcagaaatggcatgataagacaagattagcttcaggcaaaataggcaagggg
ttcagtgcttttgagcgttccatcttgacccagatagagcaaattatgatggataaagaa
aggttgataagacggactcagaccaaaagatccttgtataaaattcttggaaaagtggaa
gaagattctcagcaggttccagagtctgtacctggggagatggaggttgtgccacaagga
aagtcaaatgtacatctgaaagacatagatgaagagatttttgatgacaacgatttttac
catcagctcctcagagaactaattgagcggaagactactgctatagattcaaatgatcag
attgcaatgggccgacaatggcttgcaattcagaaactacgaagtaggatcaagaaaaaa
gtagataccaaagcaagcaagggcagaaaagtaagataccatgttcacagcaaattagtg
agtttcatggcacctattgaccatagtacaatgaatgatgatgcaagaaggaacaccgtg
caaacctggttatcgtttaaggaagacccaagaaatattgaacacaatatcgaacatcaa
gctttgaaaaatggatttggtcttgactttctggttagatcattgaaaaatgcaaatcat
aactaa
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