Rhincodon typus (whale shark): 109930433
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Entry
109930433 CDS
T06055
Symbol
si:ch73-40i7.5
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1 isoform X1
KO
K04531
amyloid beta A4 precursor protein-binding family A member 1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109930433 (si:ch73-40i7.5)
Membrane trafficking [BR:
rtp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
109930433 (si:ch73-40i7.5)
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
109930433 (si:ch73-40i7.5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
PDZ_2
PhageMetallopep
Motif
Other DBs
NCBI-GeneID:
109930433
NCBI-ProteinID:
XP_020385502
LinkDB
All DBs
Position
29:complement(12449627..12469149)
Genome browser
AA seq
774 aa
AA seq
DB search
MNRQEGITEIDNPPLTSSQRMNGVRMGDQELENDEVNVESIQAEVDKDVSLENHCSWDAN
GETLEEDFNGDERCALLSKDVTEKDNFVDIVELENTLSEGGSASVYLSDLMTDSENNLIR
NGVIDLSSETDNIEKTSDLQDDDHCQIKLLLSQLRLYEQGTVTLGSKAKLLDGYSLESGG
KLTTCAESDSLTNDDRQLFDTINHQDVLTEMSHEPLMSTERPRRNEMKDRLHHGSELNEV
SYPGSKSGVLNHVECGDQAVKVLSHAPEGTVKNNTTLREVSSGNVFGQSVENTDRKLQHQ
QTADLCAGSFGANDDSSSLDCESLYRLKKDWRREGEALSLAIKELKEEVENISKSFLPED
VVEHADTPSRAACHTESSIREHDSQPRKKFSYPAFKEVSGPCDSEDLLDGIIFAASYLGS
TQLFSDKNPSTNVRMSQAQEAVGRIKAPEGESQPMTAVDLFISTQRIKVLNAETQEALMD
HPLQTISYIADIGTTIVFMARRRMPRKLPDQETRNSPAGKREYKMICHVFESEDASLIAQ
AIGQAFTVAYQQFLNANGINPADLSPNEYNDLLDTEFYNGDLVHFSKSENSKEVRIEKAK
GEILGLVIVESGWGSILPTVVIANLMHGGPTERSGELNIGDQIISVNGTSLVGLPLTTCQ
GIIKDLKYQSEVTLNIVRCPPVTTAIIKRPDQKHQLGFSVQDGIIYSLMRGGIAERGGIR
VGHRIIEINGQSVVATPHDKIVQRLSNATGEIHIKTMPAATYRLLTGQEQPIYI
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggcaggaaggtatcactgagattgataaccccccactgacttcaagccaacgt
atgaacggcgttaggatgggtgatcaagaactggaaaacgatgaagtcaatgtggaaagt
attcaagccgaggttgataaagatgtttctctggaaaaccattgcagctgggatgctaat
ggagagaccctggaggaagattttaatggtgatgagcgctgtgcgcttttgagcaaagat
gttaccgagaaagacaactttgtggacattgtggaactcgaaaacacattgagtgaagga
ggtagtgcttctgtgtacttgtcagacctaatgacagattcagaaaacaatttgattcga
aatggtgtgatagatttaagttcagaaactgacaacatagaaaagacttcagatcttcaa
gatgatgatcactgtcagatcaaattgcttttgagtcagttacgcctctatgagcagggt
acggtgaccttgggaagcaaagcaaaactgttggatggttatagtttagaaagcggtggc
aaactaacaacatgtgctgaaagtgattcattgaccaatgatgacaggcaattatttgac
acaattaaccatcaggatgttttgactgagatgagtcatgagcctttaatgtcgactgag
agacctagaagaaatgaaatgaaagatcggcttcatcatggcagcgaactaaacgaagta
agctatccaggttcaaagtctggtgtccttaaccatgttgaatgtggtgaccaggctgtg
aaggtattgagtcatgctcccgaaggaactgttaaaaacaacacaaccttaagagaagtt
tcatctgggaacgtgtttggtcaatctgtggaaaacactgatagaaagctccagcaccaa
cagactgctgatttatgtgcaggtagttttggggcaaatgatgactcgagctctttagat
tgtgaatcattatataggctgaagaaagactggaggagagagggagaggctttgtcttta
gccattaaagagttaaaagaagaagttgagaatattagcaaatcctttcttcctgaagat
gttgttgagcatgctgatacgccaagtcgagctgcttgccacacagaaagcagtatccgt
gagcatgatagtcagccgaggaagaaattttcttatcctgcatttaaagaagtgtcaggg
ccctgtgattctgaggatcttcttgatggaatcatatttgcagcaagttaccttggatca
acacagctgttctctgacaaaaatccatcaactaatgttcgaatgtcacaagcacaggaa
gcagtggggaggataaaggcaccagaaggagagtcacagccaatgaccgcagtggatctg
ttcatatcaacacagcgaattaaagtactaaatgcagaaacacaggaagccctgatggat
caccctctacagaccatttcgtacattgcagatattggaactacaatagttttcatggct
cgtcgacgaatgccacgtaaattgccagaccaggagaccaggaactcacctgctggaaag
cgagagtacaagatgatatgccatgtctttgaatcagaagatgcatcacttatcgcacaa
gcgataggccaagctttcactgtggcgtaccagcagtttctgaatgctaatggtatcaac
cctgcggatctgagtcctaatgaatacaatgatttacttgacacagaattttacaatggg
gatcttgtgcatttttccaagtcagagaactccaaagaggtccgtatagagaaagcgaag
ggagagatccttggccttgtaattgtggagtcaggctggggctccatcctacccacagtg
gtgatagccaacctcatgcatggtgggccaacagagcgatcaggagagctgaatatcggt
gaccaaatcatttctgtaaatggcactagtttagttggactaccacttaccacctgtcag
ggaataatcaaggacttgaaataccagtctgaagtgacactgaacattgtacgttgtcct
ccagtcaccacagcaattatcaaacgaccagatcaaaagcaccagcttggatttagtgta
caggatggcattatctacagtctcatgagaggtggaattgcagagcgaggtggaatccga
gtaggacaccgcattattgaaataaatggacaaagtgttgttgcaaccccacatgataag
attgtgcaaaggctgtcaaatgccactggtgagatacacataaagacgatgccagcagca
acgtaccgtctgctaacaggacaggagcaaccgatatacatataa
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