KEGG   Rhincodon typus (whale shark): 109930469
Entry
109930469         CDS       T06055                                 
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
  KO
K08518  syntaxin-binding protein 5
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rtp04131]
    109930469
Membrane trafficking [BR:rtp04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    109930469
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    109930469
SSDB
Motif
Pfam: LLGL Beta-prop_EML_2 Beta-prop_THOC3 WDR55 Beta-prop_WDR36-Utp21_1st WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_RIG_2nd WD40 ANAPC4_WD40 Beta-prop_WDR5 Beta-prop_TEP1_2nd Beta-prop_IFT140_1st WD40_Prp19 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd EIF3I Lgl_C Beta-prop_VPS8 Synaptobrevin Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 WD40_RFWD3
Other DBs
NCBI-GeneID: 109930469
NCBI-ProteinID: XP_048458904
LinkDB
Position
11:complement(33059734..33498416)
AA seq 1206 aa
MMKKFNFRRVLDGLTAASSPAHSGGGLGSGTGAGGGSSTGAVSGGSSAASGGGGGGAMGG
GRGGAGDSEIPETLTSEHFQICKTVRHGFPCQPSALAFDPVQKILAIGCRTGALRILGRP
GVDCYCQHDSGAAVLQLQFLINEGALVSACADDTLHLWNLRQKRPAVLHSLKFNRERITC
CHLPFQSKWLYVGTERGNTYVVNIESFVLSGYVIMWNKAIELSTKTHPGPVVHLSDSPRD
EGKLLMGFESGTVVLWDIRSKRADFRFYYDEAIHSVSWHHEGRQFMCSHSDGSLTLWNLK
NPSKPFQIIVPHGKVQRDGKKPEPCKPILKVDHKTCRYSEPFIIFSGGLSYDKVCRRPSL
TIMHGKSITVLEMDYPIVDFLALCETPYPNEFQEPYAVVVLLEKDLIVVDLTQSNFPIFE
NPYPMDVHESPVTCCAYFADCPPDLIPALYSVGAKQQKKQGYSTKEWPIAGGTWNLGAQS
YPEIIITGHADGSLKFWDASAITLQVLYKLKTSKVFEKQKMKDAKQIAEIVEEDPYAIQM
ISWCPESRMFCVAGISAHVIVYRFSKHEITVEIVALELRLQYEVEDIVTPEPESVQPITD
NSSQLSFSKTSALSSSANALTSEGLKDNVPCLKVKTRPVKMAPGYQADLVIQMVWIDGEP
PQQITSLAVSSAYGLVAFGNCNGLAIVDFMQKTTLLSMGTIELYGTNDPFQRHLKSPRKS
KQLNAETCCMRGLSSLYSLKRLRASYQSLTELLDNPVSLEIERCKSPTSDHVNGVCTSPI
SQPCNTGKRLSIADTSKLNRRGPGRPPFRKAQSAACMEISLPVTHTEESKENSFNRSRSS
SVSSIDKESKEAITALYFMESYSQKMDSTLSPCLWVGTSLGTVLVISLNLPSEEQRYSEP
LMVSPSGTVLMLKGSLLTFSFLDSLGGLIHPPYEVWKDPNNEDKDDKGRKRKLVTFSPSS
PQDIGDHQYVVLCSEKQAKVYSLPSQSCLYIHNITETSFVLRADVITMCNSICLACFCAN
GHIMTLSLPSLRPLLDVNYLPLTDMRIARTFCFTNGGQALYLSSPTEIQRITYSQEMCEN
LQEMLGDLFTPIETPEAQNRGFLKGLFGGSGQTFDREELFGEASAGKASRTLAQHIPGPG
GLEGVKGAASGVVGDLARARIALDERGQRLGELEDRTAAMMASAETFSKHAHELMLKCRD
KKWYQF
NT seq 3621 nt   +upstreamnt  +downstreamnt
atgatgaagaaatttaatttccgaagggtgttggacggtttgacagcagcgtcctctccg
gctcactcgggcggcgggctcggatctgggacaggggccggtggcggcagcagtactggc
gctgttagcggaggcagtagcgctgccagcggcggcggcggcggcggtgccatgggagga
gggagaggaggagctggggactcggagataccggagacactcacatccgaacactttcag
atctgtaagacagtgcgccatggcttcccctgtcaaccttctgccttagctttcgatcca
gtgcaaaaaatcctggctattggatgccgtacaggagcactacgaatattaggtcgtcct
ggtgttgattgttactgtcaacatgatagtggggcagctgtgctgcagcttcagttccta
atcaacgagggagctttagtaagtgcttgtgcagatgacacacttcatttatggaacctc
cgccaaaaacgtccagcagttcttcattcgctgaaattcaatcgagagcggattacctgc
tgccatctccctttccagagtaaatggttgtatgtgggcacagagcgaggaaatacgtac
gttgtgaatattgagtcttttgtcctatcgggatatgtcatcatgtggaataaagcaata
gaactgtctacaaaaactcatcccggccctgttgttcatttaagtgacagtccaagggac
gaggggaaacttctcatgggatttgaaagtggaacagttgtgctgtgggacataaggtca
aagagagcagatttcagattttattatgatgaggccatccattctgtcagctggcatcat
gaagggaggcaattcatgtgtagccattcagatggtagtttaaccctttggaacttgaaa
aatccaagcaaaccttttcagatcatagtaccacatggaaaagtccaacgggatgggaaa
aagcctgagccgtgtaaaccaatcctaaaagtagatcataagacgtgtagatatagtgaa
ccatttataatattttctggaggactttcctatgataaagtgtgcagaagacccagcctg
acaattatgcatggcaaatctattacagttctggaaatggattatccaattgtggacttc
ctagctctttgtgaaacaccatatccaaatgaattccaagaaccttatgcagttgttgtg
ctacttgaaaaagatttgattgttgtcgatctgacgcaaagcaattttcctatctttgaa
aatccatatccaatggatgtgcacgagtctccagtgacttgctgtgcgtattttgctgat
tgtcctcctgatttgatacctgcactttattctgtgggagccaaacaacaaaaaaagcag
ggatatagcacaaaggaatggccaattgctggtggcacatggaatttgggtgcacaatcg
taccctgaaatcatcataactgggcacgcagatggctcattgaaattttgggatgcttct
gccataactcttcaagtgttatacaagcttaaaacctccaaagtatttgaaaagcagaaa
atgaaagacgcaaagcagattgcagaaattgttgaagaggatccgtatgctatacaaatg
atcagctggtgtccagagagcagaatgttctgtgtcgctggcatttcagcacatgtgatt
gtttacagattcagcaagcatgaaattactgttgagatagtggctctggaactgcgatta
cagtatgaagttgaagatattgttacccctgaacctgagtctgtacagccaatcactgat
aattcttcacaactttccttttcaaagacttctgcattatcaagtagtgcaaacgcatta
acatcagaaggattaaaggacaacgtcccatgtctcaaggtcaaaacccgacctgtaaaa
atggctccagggtaccaagctgatcttgtcattcagatggtctggatcgatggagaacca
cctcaacaaatcacaagcctagcagtaagctctgcctatggccttgtggcatttggaaat
tgtaatggtttggcaattgtggactttatgcaaaagactactctactcagcatgggaact
attgaactttatggtacaaatgacccatttcaacggcatcttaaatcacctcgaaaaagc
aaacaactcaatgcagaaacttgttgcatgcgtggtctatctagtttatactcactgaaa
cggctccgtgcatcttatcagagtttgactgaacttcttgataaccctgtatcactggag
attgaacgctgcaaatctcccacttcagatcatgtcaatggagtttgcacaagtcctatt
tcccaaccctgcaacactgggaagcgtctttccattgctgatacttcaaagctgaatcgt
cgaggaccaggccgaccaccatttcgaaaagcacaatcagcagcctgcatggaaatctca
ttgcctgtcacccacacagaagaaagtaaagaaaattcttttaaccggtcccgaagttcc
agtgtctccagcattgacaaagaatcaaaggaggctataactgctctgtactttatggag
tcctacagccaaaagatggattctaccctctcaccatgcctttgggttggtaccagttta
ggtacagtgctagtcatctccttgaacctaccttcagaggaacaaagatattcagaacca
cttatggtctctcccagtggaacagtgttaatgttaaaaggatccctactaacattttcc
ttcttggactctctgggtggtttaatacaccctccatatgaagtgtggaaggatccaaac
aatgaagataaagatgataaaggacggaaaagaaaactcgtaacattttcaccatcttcc
cctcaggacataggggatcaccagtatgtagtgctctgctcagagaaacaggctaaagtc
tattctctcccttctcaaagctgtctttacatacacaatattacagagacttcttttgta
ttacgagcagatgtcataactatgtgcaacagcatctgcctggcctgcttctgtgctaat
ggacacattatgaccctaagcttgccaagtcttcgcccattgttggatgtaaactacttg
cctttaactgatatgagaatagcacgaactttctgttttacaaatggtggacaagctctg
tatctaagttcccccactgaaatccagcgaattacttacagccaagagatgtgtgaaaac
cttcaggaaatgcttggagatttgtttaccccaattgaaaccccagaagcccaaaataga
ggcttcttaaaggggttgtttggaggaagtggacaaacgtttgacagagaagaattattt
ggtgaagcttcagcaggcaaggcatctcggactcttgctcagcatatccctggacctggt
ggacttgagggagttaaaggtgcagcctctggagttgttggagatctagcccgtgctcgg
attgctttggatgaacgtggacagagactgggcgaactggaggaccgaactgcagccatg
atggcgagtgcagagacattctctaaacatgcacatgagttgatgctgaaatgcagagat
aagaaatggtatcagttctga

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