Rhincodon typus (whale shark): 109930474
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Entry
109930474 CDS
T06055
Symbol
pgap3
Name
(RefSeq) post-GPI attachment to proteins factor 3 isoform X1
KO
K23553
post-GPI attachment to proteins factor 3
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
rtp01100
Metabolic pathways
Module
rtp_M00983
GPI-anchor remodeling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
109930474 (pgap3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109930474 (pgap3)
Membrane trafficking [BR:
rtp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
109930474 (pgap3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Per1
Motif
Other DBs
NCBI-GeneID:
109930474
NCBI-ProteinID:
XP_020385544
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All DBs
Position
30:37521807..37544147
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AA seq
318 aa
AA seq
DB search
MRGNALAFYCLGLAAFGLPAASCSQGDREPYYRDCVQLCERHNCTGARLRVFHKLQPLYM
MAAGWSCADDCQYNCMWLTVGLYIQEGHKVPQFYGKWPFYRFLFFQEPASAFASMLNGLA
NYVMLGRYRAAVPLESPMYHTCISFAMITLNAWVWSTVFHTRDTPLTEKMDYFCASSVVL
YSIYLCCVRTMGLTHPWTASIFGVLLIGLFTCHIWYLTFVRFDYGYNMAANVLIGMINLL
WWLSWCLWNRCHLPYVWKCMVVVVMLHGLALLELLDFPPLLWVFDAHAVWHFSTIPVPFL
FYSFLIDDSRHLLDVKTE
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcggggtaatgctctggccttttactgcttgggcctggccgctttcggtctgcctgcg
gcctcctgctcccagggggaccgggagccctattaccgcgactgcgtccagctgtgtgag
cgacacaactgtactggagcccggctgcgggttttccacaaactgcagcccctctacatg
atggcagcaggttggagctgtgccgacgactgtcaatacaactgtatgtggctgacagtg
ggactgtacattcaggaaggacacaaagtgcctcaattttacggcaagtggcccttctac
cgatttctgttcttccaggaacctgcctcggcctttgcctctatgctgaatggactggcc
aactacgtgatgttgggcaggtaccgggctgcagtgcctctagaatctcctatgtaccat
acatgcatctcctttgccatgatcaccctcaatgcctgggtttggtccaccgtattccac
acacgtgacactccactaactgagaaaatggattacttctgtgcttcatcagtggtgctg
tactccatctacctgtgctgtgtccggaccatgggcttgactcacccttggacagccagt
atttttggggtcctactcattggattgttcacatgtcacatctggtacctcacctttgtg
cgttttgattatgggtacaacatggctgccaatgtcttgataggaatgattaatctcctg
tggtggctcagctggtgcctctggaacagatgtcacctcccctatgtgtggaagtgtatg
gtggttgttgtgatgctgcatggactggctttgcttgagctcctggacttccctccattg
ctgtgggtgtttgatgctcatgcagtctggcacttcagcaccatccctgtgccattcctc
ttttacagctttctgattgatgatagtcggcacctcctcgatgtgaaaactgaataa
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integrated database retrieval system
