Rhincodon typus (whale shark): 109930521
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Entry
109930521 CDS
T06055
Symbol
trim36
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109930521 (trim36)
04121 Ubiquitin system [BR:
rtp04121
]
109930521 (trim36)
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109930521 (trim36)
Membrane trafficking [BR:
rtp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
109930521 (trim36)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109930521 (trim36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
zf-B_box
ANCHR-like_BBOX
SPRY
fn3
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
CRLF2-like_D2
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
109930521
NCBI-ProteinID:
XP_048450876
LinkDB
All DBs
Position
3:71642527..71751293
Genome browser
AA seq
738 aa
AA seq
DB search
MSDSDDISEFGFIVDRISRGEVPIKNIERELICPCCKELFTHPLILPCQHSVCHKCAKEL
LLFRDDAVTELDSEFSNPATPVSSPRNRRLSSASVERLDRLTRTGWKRTIHSQGITTFPC
PSCKHDIDLGERGLSGLFRNFTLETIVERYRQAARAAVAIMCNLCKPPPQEATKSCMDCK
ASYCNECFKLHHPWGTPKAQHEYVGPTTNFRPKILMCPEHDMEKVTMYCEVCRRPVCHLC
KLGGSHANHKVTSMSSAYKALKEKLSKSIGYLISKEDQVKTQIFQLEHMIQQTESNGEKA
KREATDMIDGLCTILEQRKMKLIKSIEDSHSSKLEKLRNQMDEYQGMLENSGLVGYAQEV
LKETDQSCFVQTAKQLHVRIRMATESLKTFQPAAEPTFIDFTLDVSREEEILKELSFTNV
PDAPVIDLTQSRLYDEGTISWQQPSGTPPVDHYKLEYRRLDQDGDCAWESTEDVCGTSKV
ISNLDTNTSYIFRVKGCKNSIYSDYSKQVVLHTPPAPVLRFLFDEKCGYNSDHLILNKQR
DSVESVAGLPMLLGAERIVVGSYMSLDFITGDTGVTKGKYYWTFRVELGSYLVKVGVVSD
TKLQEWFHSPRDINSPRYDQDSGHDSGSEDIALEHSQPFTFVTIGMRRLFIPKGSASSST
ESYKRSLSTPNRIGICLDYDKGRANFYNADTMQCLYERRVECSGTMYPAFGLMGGGAVHL
DELITVKESTKLNFFLDS
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattctgatgatatcagtgagtttggattcatcgttgacaggatctccagaggc
gaggttcccattaagaacatagagcgggaattgatctgcccgtgctgtaaggagctcttc
actcaccccctgatccttccctgccagcacagtgtctgccacaaatgcgccaaagagttg
ctgctgttccgggacgatgcggtcaccgagctggactcggagttctccaacccggccaca
ccagtcagcagcccccggaaccgccgcctctcctcggccagtgtcgagaggctcgataga
ctcactaggacaggctggaaacgaaccatccacagtcaaggaatcaccaccttcccttgt
cctagctgcaaacatgacatagatcttggagaacgtggccttagtggtctgttccgaaac
ttcaccttggaaacaattgtggaaagatacagacaggccgctagagcagcagtggcaatc
atgtgcaatctctgcaagcccccaccccaggaggccacaaagagctgcatggactgcaag
gcaagctactgcaatgagtgtttcaaactccatcatccttgggggactccaaaggcccag
catgagtatgtaggaccaacaaccaacttccgacctaagatcctgatgtgtcctgagcat
gatatggagaaagttaccatgtattgtgaggtatgcagacggcccgtgtgccacctctgt
aaactgggcggatcacatgccaaccacaaagtaacttctatgagcagtgcctacaaagcc
ctgaaggagaagctatccaagagtatcggttacctcatcagcaaagaggaccaagtgaaa
actcagatctttcaactggaacacatgattcagcagacagagagtaatggagaaaaggcg
aaaagagaagccactgatatgattgatggcctgtgtaccatcctggaacagcgcaaaatg
aaacttatcaagtcaattgaggacagtcattcatcaaaactggagaaactacgaaaccaa
atggatgaatatcaggggatgctggaaaacagtgggctggttggatatgcccaagaagta
ctgaaggaaacagaccaatcctgctttgtacagacagcaaagcaactgcatgttaggatc
cgaatggctactgaatcccttaagacattccagccagctgcagaaccgaccttcatagat
ttcactctggatgtttcccgagaggaggaaatccttaaagaactgtcattcacaaatgtt
ccagatgcgccagttatcgacctgacacaaagccggttgtatgatgagggaaccatcagc
tggcaacaacccagtggcactcctcctgttgaccactacaagcttgaatataggagactc
gaccaagatggagactgtgcctgggagtccactgaagatgtgtgtggcacaagtaaagtc
atctcaaatcttgacaccaatacgagctacatcttcagagtgaagggctgcaagaattcc
atctacagtgactacagcaagcaggtagttctccatacaccgcctgctccagttttaagg
tttttgtttgatgagaagtgtggctacaacagtgatcacctgatcttaaacaaacagaga
gactctgtggagagtgttgctgggcttcccatgttactcggtgcagaacggattgtggtt
ggaagttatatgtctctggacttcatcactggggacacaggagtaacaaaaggaaaatac
tactggaccttccgagtggagctcggctcatatctggttaaagtaggtgtggtgtccgac
acaaagctgcaagagtggtttcacagtccacgagatatcaacagtcccaggtacgatcaa
gacagtggccatgacagcgggagtgaagatattgctttggaacactcccaacctttcact
tttgttaccatagggatgaggaggcttttcatcccgaaaggttctgccagttcatccaca
gaatcttacaaacgctctctatccactcccaatcgaattggcatttgcctggactatgac
aaagggagagcgaatttctacaatgcagatactatgcagtgtttgtatgaaagaagggtg
gaatgttctggaacaatgtatcctgcctttgggctaatgggaggtggggcagtacatctg
gatgaattaattacagtgaaagaatctacaaaacttaatttctttctcgattcttga
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integrated database retrieval system
