Rhincodon typus (whale shark): 109930580
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Entry
109930580 CDS
T06055
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2-like
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109930580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtp03021
]
109930580
03036 Chromosome and associated proteins [BR:
rtp03036
]
109930580
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109930580
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109930580
PBAF complex
109930580
GBAF(ncBAF) complex
109930580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIFT
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
109930580
NCBI-ProteinID:
XP_048470715
LinkDB
All DBs
Position
30:16759853..16806170
Genome browser
AA seq
489 aa
AA seq
DB search
MHFEKMATRVGGGYPMNPGSPLNPSLGVMPGQAVRMPLNLQQQSPVFRTMGPGGAYNRGG
MPPGARMGMPGMQMSMPSGSSFMGNPSMRPGIPQPMMDPFRKRLLPQQQPPQLMQNRGRG
VKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLEIQESMKKPLMQKRKL
RIYISNTFAPAKPEGDEGETVASWELRVEGKLLDDPGKVKRKFSSFFKSLVIELDKDLYG
PDNHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDARLARLLGVHTQ
TRANIMQALWLYIKKNKLQDSHEKEYINCNRYFKQIFNCMRMKFSEIPIKLAGLLQHPDP
IIINHMISVDPNDQKKTACYDIDVEVDDPLKSQMNNFLLSTTNQQEIAVLDIKIHDTIES
INQLKIQRDFMLSFSNHPQEFIQDWIKSQCRDYKIMTDVIGNPEEERRAEFYHEPWTQEG
VGRFIFSKV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcactttgaaaaaatggcgacaagagtaggcggagggtaccccatgaacccagggagc
cccctgaatccttccttgggggtgatgccaggacaagcggtcaggatgccactaaacctc
cagcagcaatctccagtcttccggacgatgggtcccggcggcgcttacaaccgaggaggg
atgccaccaggagctcgcatgggaatgccaggaatgcagatgagcatgccatctggctca
tctttcatgggcaacccttccatgagaccaggtattccgcagccaatgatggacccgttc
cggaaacgtctgcttccacagcagcagcctccacagttgatgcagaatcgtgggagaggt
gtcaagagacgaaagatggctgacaaaattctaccacaaaggatccgagaacttgtccca
gaatcccaagcttacatggacctcttagcttttgagcgcaaactggatcagacaataatg
aggaaacggctggagattcaagagtctatgaagaaacccttaatgcaaaagcgtaaacta
aggatctacatctctaacacctttgctcctgccaagccggagggcgatgaaggagaaact
gttgcatcatgggagcttcgggtagaaggaaagctacttgacgatcctggaaaagtgaaa
aggaaattctcatcctttttcaagagtctagttatcgaattggacaaagatctttatgga
ccagacaatcacttagtggagtggcaccgaatgcctacaactcaggagacagatggcttt
caggtgaagagaccaggagatgtgaatgtgaagtgtaccctgctattgatgctggaccac
cagcccccacagtataaactggatgccaggttggcacgattgctgggtgtccacacgcag
acacgggcaaatatcatgcaggcactgtggctgtacatcaagaagaacaagctgcaggat
agccatgaaaaagaatacatcaactgcaatcgctacttcaaacagatctttaactgcatg
cgaatgaaattctctgaaattccgataaagttggctggtctcctgcagcacccagatccc
atcattattaatcacatgattagtgtggatcctaatgatcagaagaaaactgcatgttat
gacattgatgttgaagttgatgaccctttgaagagtcagatgaacaacttcctcctttca
acaaccaaccagcaggaaatcgcagtgttggatattaagattcatgacacaattgaatct
atcaatcagttgaagatccaacgtgactttatgctgagcttcagcaaccacccacaggag
ttcatccaagactggataaagtcccaatgtcgagactacaagattatgacggatgtcatt
ggaaatccagaagaggagagaagggctgagttttatcatgaaccatggacacaggaaggg
gtcggacgattcatcttctcgaaggtataa
DBGET
integrated database retrieval system
