Rhincodon typus (whale shark): 109930872
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Entry
109930872 CDS
T06055
Symbol
srbd1
Name
(RefSeq) S1 RNA-binding domain-containing protein 1 isoform X1
Organism
rtp
Rhincodon typus (whale shark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
Tex_central_region
S1
HHH_9
HHH_7
YqgF
HHH
HHH_6
VWA_4
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
109930872
NCBI-ProteinID:
XP_048457213
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All DBs
Position
9:65143152..65409612
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AA seq
997 aa
AA seq
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MSGITKLSQKRPFSEDDDSFLNASSESDSEEEEEEEWIPKNKIARKPKKSTAKPVTAKKK
VKSEAGSTCTSKTSVKRSTIKTAVKKSRKKTPEKTKVDPTVMSHPIVLNNSEDKLPLQTE
QDLESMKRMPQQPAIQIKKEIGHCVVKVEQPSTSTHLGDRKIKEEPDISFTWEEPALKKQ
KTENYPDGKPVKLQRGCVEIGEMQMNWNITQVLSERTNTDAWACANVIRLFKEENTIPFI
ARYRKELTNNMDADTLREVQQTLEELTTVIKKAHTAIQKLAKDEKLTPFLNKTLLNCQTV
EEVEHVFAPYKSGSKKTKAQQARQLGLEPAANLLIDRPGELNLNNYIKTNVKGLSNVGEI
ETGIRHILADMMSKDTETLNRIRKLCEQNVVFIHSTLTKATAKEKDGHRKDTEKFRLYHN
FSSSTGNIHHHQTLAINRGEKLKILTVKVSIPDRVKNEFCRWCVNERWRPRYFARPELMT
LLKDSVEDSYKRLIYPLLCREFRSRLSTDAEKESVAMFGRNLRQLLLINPVRGRVLMGID
PGFKHGCKMSIISATGQILHTDVIYILGQGAQREAEKIKHLLHKYSCSTIVIGNGTACRE
TESFFADLINRKYFAPLDVVYCITNEAGASIYSVSPEAAKEMPDLDPNIRSAVSIARRVQ
DPLAELVKIEPKHIGVGMYQHDVSQTLLKATLDSVVEECVSFVGVDINISSETLMRHVAG
LNASRAKNIIEWREKNGPFINREQLKEVKGLGPKTFQQCAGFIRINPENIKNFCSNQQKS
NSAAGGQQAAEAGSSSKTGGRGGATVKTSKKKGKSQCTSVQPNPLDQTCIHPESYNTAMR
FLSFISGDLSDIGRPAMQCNVNAALKTSSMDALAEKFETTVPTLQTIIDGLVQPHDYDIR
AGFEQQDFKRNIVSLNDLRTGTVLTGRVENATLFGVFVDIGVGRSGLIPIRYITAAKLPA
TKRRRSLGLGPGERVEVKVLEIDHARNRISLDLIRVL
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaataacaaagttaagtcaaaagcgaccattttcagaagatgatgattcattt
cttaatgcaagttctgaatctgattctgaagaggaggaggaggaagaatggattccaaaa
aataaaattgcaaggaagccaaagaaatctacagcaaaaccagtgacagcaaaaaagaaa
gttaagtctgaagcaggaagtacatgtacaagtaaaacgtcagtaaaaagatctacgata
aagacagcagttaaaaagagcaggaaaaaaacaccagaaaagaccaaagtggatcctact
gtaatgagtcatccaatagttttgaataacagcgaagataaattacctttgcaaactgag
caagatttagaaagcatgaaacggatgcctcagcaacctgcaatacaaataaaaaaagaa
attggacattgtgtggttaaagtggagcaaccatcaacaagcacacatttgggtgacagg
aaaatcaaggaagaaccagatatatctttcacatgggaggaaccagctttgaaaaagcag
aagactgagaattatccagatggcaaaccagtaaaactacaacgaggatgtgtagaaatt
ggggaaatgcagatgaactggaatataacccaggttttgtctgagaggacaaatacagat
gcatgggcctgtgcaaacgtcattcgtctatttaaggaagaaaacactattccatttatt
gcccgatatcgaaaagagcttaccaataacatggatgctgatactttgcgagaagtacaa
cagacacttgaagaattgactacagtaataaagaaagcgcacacagccatccagaaacta
gcaaaagatgaaaaacttacaccatttttaaataaaactttgttgaactgccagactgtg
gaagaagtggaacatgtgtttgctccttataaaagtggaagtaagaagacaaaagctcag
caggcacgtcagcttggcttagaacctgcagcaaatctactgattgaccgtccgggagaa
cttaatctcaataattacattaaaacaaatgtaaaaggtctttcaaatgtgggagaaata
gagacaggaattcggcacatattagcagatatgatgtctaaagacacagaaacattgaac
cgtatccggaaattgtgtgaacaaaatgtagtttttattcattcaactttgacaaaagca
actgcaaaagaaaaggacggacacagaaaagatactgagaaattccgtctctaccataat
ttcagcagcagcaccggaaacattcatcatcatcagactctggccattaaccgaggggaa
aaattgaaaatcctgacagtgaaggtcagcattcctgacagagtgaaaaatgagttctgt
agatggtgcgtcaatgaaagatggagaccacggtacttcgcaaggcctgaattgatgaca
cttttgaaggattctgttgaagattcatataaacgtctcatatatccacttctgtgcaga
gaattcagatcccgcttaagcacagatgctgagaaggaatctgttgcaatgtttgggaga
aaccttcgacagcttcttttaattaatcctgttcgtggccgagttctgatggggattgat
cctggctttaagcatggctgtaaaatgtcaataatttcagctacaggccaaatacttcat
actgatgtgatttacatacttggtcaaggagcacagcgagaagctgaaaagataaagcat
ttgcttcataaatacagctgttcgaccatcgttattggtaatggaactgcttgcagagaa
acagaatctttctttgctgacttgataaacaggaaatattttgctccactggatgttgtc
tactgtattaccaatgaggctggagcatccatatacagtgtgagcccagaggctgctaaa
gagatgccagacctggatcccaatattagaagtgcagtctctatagcaaggcgtgttcag
gatccactggctgagttggtgaaaattgagccaaaacacattggagttggaatgtaccag
catgatgtgtcccagactttacttaaagccaccttggacagtgtggttgaagaatgtgtc
agctttgtgggagtggatatcaacataagttcggaaaccctgatgagacatgttgcagga
ctcaatgctagtagagcaaaaaatataattgaatggcgggagaagaatggaccattcatc
aacagggaacagctgaaggaagtcaaagggttgggtccaaaaacctttcaacaatgtgct
ggtttcatccgaatcaatccagaaaacataaagaacttttgcagcaatcagcagaagtct
aatagcgctgcgggaggccagcaggcagctgaagcaggaagcagttccaagacaggtggt
cgagggggagcaactgtgaaaactagtaaaaagaagggcaaaagccagtgtacctcagtg
cagccaaatcctttggatcagacatgtatccatcctgaatcgtataacacagcaatgagg
ttcttatccttcatcagtggagacctgtctgacattggaaggcctgctatgcagtgcaat
gtgaatgcagcactgaaaaccagttcaatggatgccttagctgaaaagtttgagacaact
gtaccaacactgcagacgattattgatggactggtacagcctcacgactatgacattaga
gcaggatttgagcagcaggattttaaaaggaacattgtctctctcaatgacctgagaacg
ggaactgttttgactggaagggtggaaaatgctactctgtttggcgtctttgttgacatc
ggtgttggtcgatccggtctgatccctattcgttatattacagcagccaagctgcctgca
actaaaagacgtcgaagtctaggtcttggtcctggtgaaagggtggaagttaaagtgctg
gagattgaccatgcaagaaaccgtatttcattagatcttattcgagttttgtaa
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