Rhincodon typus (whale shark): 109931020 Help Entry 109931020         CDS       T06055                                  Symbol thoc3 Name (RefSeq) THO complex subunit 3   KO K12880   THO complex subunit 3 Organism rtp  Rhincodon typus (whale shark) Pathway rtp03013   Nucleocytoplasmic transport rtp03040   Spliceosome Brite KEGG Orthology (KO) [BR:rtp00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     109931020 (thoc3)   09122 Translation    03013 Nucleocytoplasmic transport     109931020 (thoc3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:rtp03019]     109931020 (thoc3)    03041 Spliceosome [BR:rtp03041]     109931020 (thoc3) Messenger RNA biogenesis [BR:rtp03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      109931020 (thoc3) Spliceosome [BR:rtp03041]  Complex C   Other components    EJC/TREX     109931020 (thoc3)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     109931020 (thoc3) SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st DSE1_N WD40_RFWD3 Beta-prop_WDR35_TULP_N RMC1_N eIF2A Beta-prop_TEP1_C Beta-prop_NOL10_N Beta-prop_HPS5 WD40_MABP1-WDR62_1st NBCH_WD40 WDR90_beta-prop_4th Tricorn_2nd PAC11 PD40 Beta-prop_ACSF4 B-prop_COPA_B_2nd TRM82_WD Beta-prop_NUP159_NUP214 Beta-prop_WDR75_1st Beta-prop_SPT8 ASA1 Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_NWD2_C DPPIV_N Peptidase_S9_N Beta-prop_ELP1_1st WD_LRWD1 Beta-prop_LRRK2 Cytochrom_D1 Beta-prop_DCAF4 WDCP Motif Other DBs NCBI-GeneID:  109931020 NCBI-ProteinID:  XP_020385963 LinkDB All DBs Position 12:complement(29684753..29701551) Genome browser AA seq 323 aa AA seqDB search MAAASYLLESQEHFKNNGRTKEFSAHTAKVHSVAWSCDGRRLASGSFDKTASVFVLEKDR LVKENNYRGHGDSVDQLCWHPTNADLFVTASGDKTVRIWDVRTAKCVATVNTKGENINIC WSPDGQTIAVGNKDDVVTFIDAKSHRSKAEEQFKFEVNEISWNNDNDMFFLTNGNGCINL LSYPELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWSVDELVCVRCFSRLDWP VRTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCDSPTFTVAWHPKRPLLAFACDD KDGKYDSSREAGTVKLFGLPNDS NT seq 972 nt NT seq  +upstreamnt  +downstreamnt atggcggcggccagttacctgctggaatcccaggagcatttcaaaaataacggccgcact aaggaattctcggcccatacggccaaggtgcactcggtggcttggagctgcgatggacgc aggctcgcgtctggctctttcgacaagacagccagtgtgtttgtgctggagaaggatcgg ctggttaaggagaataattatcgtggtcatggtgacagtgtggatcaactctgttggcac ccaaccaatgcagatctctttgtaactgcttctggtgacaaaacggttagaatctgggat gtccgaactgcaaaatgcgttgctactgtgaacacgaaaggtgagaacattaatatctgt tggagtcctgatggccaaacgattgctgtgggaaataaagatgatgtggtgactttcatt gatgcaaaatcacaccgatcaaaggctgaagaacagtttaagtttgaagtgaatgagatc tcctggaacaatgataatgatatgttttttctaaccaatggcaatggctgcatcaactta ctcagttatccagagttgaaaccgattcagtcaatcaacgcacatccttcaaattgcatc tgtattaagtttgatccaacaggcaaatactttgccacagggagtgctgatgctctggtt agtctatggagtgtggatgagctcgtctgtgtaagatgcttctccagacttgactggccc gtgaggacattgagcttcagccatgatggaaaaatgctggcatctgcttcagaggatcac ttcattgacattgcagaagtagaaactggtgagaaactatgggaggtgcagtgtgactca cctactttcactgtagcatggcatccgaaacgaccactcttagcttttgcttgtgatgat aaagatggcaagtacgatagcagtcgggaagctggaacagttaaactcttcggacttcct aatgactcttaa

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