Rhincodon typus (whale shark): 109931240
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Entry
109931240 CDS
T06055
Name
(RefSeq) tubulin beta-4B chain-like
KO
K07375
tubulin beta
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04145
Phagosome
rtp04517
IgSF CAM signaling
rtp04540
Gap junction
rtp04814
Motor proteins
rtp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109931240
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109931240
09144 Cellular community - eukaryotes
04540 Gap junction
109931240
09142 Cell motility
04814 Motor proteins
109931240
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109931240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109931240
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109931240
04147 Exosome [BR:
rtp04147
]
109931240
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
109931240
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
109931240
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109931240
Exosomal proteins of colorectal cancer cells
109931240
Exosomal proteins of bladder cancer cells
109931240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
109931240
NCBI-ProteinID:
XP_048469564
LinkDB
All DBs
Position
28:complement(1788391..1798362)
Genome browser
AA seq
445 aa
AA seq
DB search
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGAYHGDSDLQLERINVYYNEATGGKYV
PRAILMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTDGAELIDSVLDVV
RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETFCIDNEALYDICFHTLKLTTPTYGDLNHLMSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMTGFAPLTSRGSQQYRALSVPELTQQMFDAKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSTYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATVGDEGEFEEEGEEEAA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaaatcgtgcaccttcaggcaggccaatgtggcaaccagatcggagccaagttc
tgggaagtcatcagcgatgagcatggcattgatcccactggagcctaccatggagacagt
gatctgcagctggaaaggatcaatgtgtattataacgaggctacaggtggtaaatatgta
ccccgagcaattcttatggatttggagcctggtactatggattctgttcgctcaggaccc
tttgggcaaattttcagaccagataactttgtgtttggacaaagtggtgctggtaacaat
tgggccaaaggacattacactgatggagctgaattaattgactctgttctggatgtggtg
agaaaggaggctgaggggtgtgattgcctccagggattccagcttacccattcattgggt
ggtggtactggttctggcatgggtacactccttatcagtaaaatccgcgaagaatatcct
gacagaatcatgaatactttcagtgttgtgccttcaccaaaagtgtcagacacagttgta
gaaccttataatgccaccttgtctgtccatcagcttgtggagaacactgatgaaacattc
tgtattgacaatgaggctctatatgacatctgtttccatacccttaaactgacaacgcca
acttatggtgatttgaaccacctgatgtcagccactatgagtggtgtaacaacctgtctg
cgctttcctggtcagctcaacgctgacctgcgtaaactagcagtgaatatggtgcctttc
ccccgactgcatttcttcatgacaggttttgctcctctgaccagccgtggcagccagcag
taccgtgccctctcagtacctgagcttacccaacagatgtttgatgccaagaacatgatg
gcagcttgtgaccctcggcatggccgctacctgactgttgctgccattttccgaggccgg
atgtccatgaaagaggtggatgaacaaatgttgaatgtccagaacaaaaatagcacatat
tttgttgaatggattcccaataatgttaagacagctgtttgtgacatcccgcctagaggc
ctcaagatgtctgccacctttattggcaacagtacagctatccaggagctgtttaaacgc
atctctgagcagtttactgctatgttccggcggaaagccttcttgcattggtacactggt
gagggcatggatgagatggagtttactgaggctgagagtaacatgaatgacctggtttct
gagtaccagcaatatcaggatgctacagttggagatgaaggtgaatttgaggaagagggt
gaggaagaggctgcataa
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