Rhincodon typus (whale shark): 109931241
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Entry
109931241 CDS
T06055
Name
(RefSeq) tubulin beta-4B chain-like isoform X1
KO
K07375
tubulin beta
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04145
Phagosome
rtp04517
IgSF CAM signaling
rtp04540
Gap junction
rtp04814
Motor proteins
rtp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109931241
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109931241
09144 Cellular community - eukaryotes
04540 Gap junction
109931241
09142 Cell motility
04814 Motor proteins
109931241
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109931241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109931241
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109931241
04147 Exosome [BR:
rtp04147
]
109931241
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
109931241
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
109931241
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109931241
Exosomal proteins of colorectal cancer cells
109931241
Exosomal proteins of bladder cancer cells
109931241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
TrmK
Motif
Other DBs
NCBI-GeneID:
109931241
NCBI-ProteinID:
XP_048469273
LinkDB
All DBs
Position
28:complement(1818883..1875824)
Genome browser
AA seq
483 aa
AA seq
DB search
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGFGIEFSPVSVGRNSPDNFKNCPLEIPI
LKRNTEKKHNAGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGG
GTGAGMGTLLISKIREEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDETYC
IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFP
RLHFFVPGFTPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRM
SMKEVDEQMLNVQNKNSTYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRI
SEQFTAMFRRKAFLHWYTGEGMEETEFTEAESNMNDLVSEYQQYQDATSGEEAEEEELGG
EEN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagatcgtgcatcttcaggcgggccagtgtggcaaccagatcggggccaagttc
tgggaagttatcagtgatgagcatggcatcgatcctaccggaacctaccatggagacagt
gatctccaactggagagaattaatgtctattataatgaggctacaggtggcaagtatgtg
ccccgtgctgtgctcatggatttggagcctggtactatggactctgttcgctctggtccg
tttggacagattttcagaccagataactttgtgtttggatttggaattgaatttagtcca
gtttctgttgggagaaactctcctgataacttcaagaattgccctttggaaatcccaatt
ttaaagagaaacacagaaaagaaacataatgcaggtcagagtggtgctggcaacaactgg
gccaaaggacattacactgaaggagctgaactggttgactctgtcctggacgtggtgaga
aaggaggcagaaagttgtgattgtctccagggctttcaacttacccactcactgggtggt
ggtactggtgctggcatgggcacactcctcatcagcaagatccgtgaagaataccctgac
agaataatgaacacatttagtattgtgccttcaccaaaagtgtcagacacagtagtagaa
ccttataatgccaccctgtctgtccatcagcttgtggagaacactgatgagacttattgt
attgataatgaggctctgtatgacatttgtttccgaaccctcaaactcacgactcctact
tatggtgacctgaaccaccttgtgtcagctaccatgagtggtgtaacaacctgtctacgt
ttccccggtcagctcaatgctgacctgcgtaaactagcagtgaacatggtccccttcccc
cgtctgcacttttttgtgccagggtttactcctctgaccagccgtggcagccagcagtac
cgtgccctcacagtacctgagcttacccaacagatgtttgatgccaagaacatgatggct
gcctgtgaccctcggcatggccgctacctgaccgttgctgctgttttccgaggccgcatg
tccatgaaagaggtggatgaacaaatgttgaatgtccagaacaaaaacagcacgtatttt
gttgaatggattcccaataatgttaagacagctgtttgtgatatcccacctcgaggcctc
aagatgtctgccacctttattggcaatacaacagcgatccaggagctgttcaaacgcatc
tctgagcagtttactgccatgttccggcggaaagccttcttgcattggtacactggtgag
ggcatggaagagactgagttcactgaggctgagagtaacatgaatgacctggtttctgag
taccagcaataccaggatgccacatctggagaggaggccgaagaggaagaattaggagga
gaagaaaattaa
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