Rhincodon typus (whale shark): 109931246
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Entry
109931246 CDS
T06055
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X3
KO
K14307
nucleoporin p58/p45
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109931246 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109931246 (nup58)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109931246 (nup58)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Nup49_C
FapA
PSY3
Motif
Other DBs
NCBI-GeneID:
109931246
NCBI-ProteinID:
XP_020386169
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All DBs
Position
6:complement(35027972..35109965)
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AA seq
557 aa
AA seq
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MTTGFGFGTAAGNTGGFTLGASSNPGTTGGFSFGNLGTTAATTTTTATFGGLGGGLFGQK
QTTGFSFGATSTGTTTTAASTGLTLGTPATTTLAGFSLGFNKPAGSATPFAMPIAPSTTG
GLGLSSVLPTSTAGSTGFALNLGGAPTSTASVPTGLTLGGALTGLSGSLFQGASTSTAGL
GQSLGLNLGVSTAAPTTTASEGLGGIDFSGSSDKKNDKGSTGVRPDDSKALKDENLPPVI
CQDVEHFQKFVKEQKQVQEEISRMSFKAMLKVQEDIKALKQLLAVVASGLQRDSLAIDKL
KIESAQELKNAEIALRTQKIPPGLQHENTAPADYFRQLVEQFEVQLQQYRQQIEELENHL
AAQANSSHMTPQDLSLAMQKVYQTFVALAAQLQSIHESAKILREQYLGYRKTFLGDATDV
FEARRTETKKWQNVPRITTGPTPFSIPNAAAVAMAATLSQQQQPATGPQQPLGVNFGTPF
ATCIGTGLQSSGLGSSNLGGFGSSTTSGFNFNNPGITASAGLTFGVSNPSTSAFPNNLGT
QLLQLKKPPAGNKRGKR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgacaactggatttggtttcggtaccgcggccggtaacactggcggcttcactctcgga
gcgtccagcaatcctggtaccacaggaggatttagtttcggaaatcttggtaccaccgct
gcaaccacaaccacaactgcaacatttgggggccttgggggtggactgtttgggcagaaa
caaactactggattctcatttggagctacctcaacagggactacaacaacagcagcatct
acaggactaactttgggaacacctgcaactaccacgttagctggttttagtttaggcttc
aacaaaccagctggttcagcaacaccttttgcaatgcctattgcaccttctaccactgga
ggattgggcctttcatctgtactgccaacatctacagcaggctctacgggatttgcgtta
aatttgggtggagcacccacatccactgcatcagtaccaacaggcttaacattgggaggg
gctttgactggattaagtggcagcctctttcagggtgcaagcacttccactgcaggactt
ggtcaatcactggggttgaatcttggggtatctacagctgccccaacaactactgccagt
gaaggtcttggtggcatagattttagtgggtcgtctgataagaagaatgataaaggttca
actggagttaggccagatgatagcaaggccctgaaagatgaaaatctgccacctgttatc
tgtcaagatgtggagcacttccagaagtttgtaaaagaacagaagcaggtgcaagaagaa
attagtcgaatgtcctttaaagctatgttgaaagtacaagaggatatcaaagcgctgaaa
caattattagcagtagttgccagtggacttcagagagattcacttgccatcgacaagcta
aagatagaatctgcacaggagcttaaaaatgctgaaatagcactccgaacacagaagata
ccgccaggacttcagcatgaaaatacggcaccagcagactatttcagacagctggttgaa
cagtttgaggttcagttacagcagtaccgacagcaaatagaggaattggaaaatcacctt
gctgctcaggctaacagttcacacatgactccacaagatttgtctcttgcaatgcagaag
gtataccagacttttgtggctttggctgcccaactccaatcaattcatgaaagtgcaaag
attttaagagaacagtatcttggctaccggaaaacattccttggagatgctactgatgtc
tttgaagcaaggcgtactgaaactaagaagtggcagaatgttccacgcattacaactggg
ccaactcccttcagcataccaaatgcagcggcagttgccatggctgcaacattatcacag
cagcaacagcctgctacaggaccgcaacaacctctgggagttaattttggaacaccattc
gccacatgtattggtacaggcttgcagtcaagtggcttaggttcttcaaatcttggaggc
tttggcagctcaaccacatctggatttaacttcaataatcctgggatcacagcttctgct
ggcctgacttttggcgtgtcgaatccttcaacatcagccttccccaataatctagggaca
cagcttctgcaactgaagaaacctccagctggaaacaaacgaggcaaaagatag
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