Rhincodon typus (whale shark): 109931292
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Entry
109931292 CDS
T06055
Symbol
rpap3
Name
(RefSeq) RNA polymerase II-associated protein 3 isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtp03021
]
109931292 (rpap3)
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
109931292 (rpap3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP3_C
TPR_1
TPR_2
TPR_8
TPR_11
TPR_16
TPR_12
TPR_19
Motif
Other DBs
NCBI-GeneID:
109931292
NCBI-ProteinID:
XP_048463594
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All DBs
Position
18:52236395..52283893
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AA seq
454 aa
AA seq
DB search
MKLKNFQGAKEDFEMALNLDAQNFEAQNELRKVNEALAPDQKDQNQVSTDEQMDTNDEKK
LTEAQAKQEAIFEKDLGNEYFKEGRYLEAVECYTRGMAADGANALLPANRAMAYLKLKKF
AEAEADCSQAISLDNTYSKAFARRGTAKMCLGKMEEAKEDFEMVLLLEPGNKQALTELGK
INKELALQGVPTQQTSSTSNKGQRIIKPIDKPPHLRSTKPLIRVAIEEVGDTVINTKKEA
AAVSFPFDVAAKPPTMVSAVEETNKIQEKNTPEDCSVPTVEAPNAKILKVEESGHHVVSD
KQPITANAATVEKSAEMKKVEVPLFSHSVIVPQAPANAFQLEADLRKLKNYPEMLYKYIK
QIEPSLYTQLFQKSLEPDILNHILRIFHDSYIRFEEPSLILDVLRNLANVKRFDMAVMFM
SESERQVVKDLFDHLQKSGVEEESLKTLKSRYSV
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgaaaaactttcagggtgcaaaagaagattttgaaatggcgctaaacttggat
gcacaaaactttgaagcacagaatgaactcagaaaagtgaatgaggctctcgcaccagat
cagaaagatcagaaccaagtaagcacagatgaacaaatggataccaatgatgaaaagaaa
ctgacagaggcccaagcaaaacaggaggcaatttttgaaaaagatttgggcaatgagtac
ttcaaagaaggaaggtatttagaagcggttgaatgctatactagaggaatggcagcagat
ggcgccaatgcacttttacctgccaaccgggccatggcttaccttaaacttaagaaattt
gcagaggcagaagctgattgcagccaggcaatctcactggataatacctactccaaggca
tttgcacgaaggggaactgccaaaatgtgcctagggaagatggaggaagcgaaagaagat
tttgaaatggtactgttgctggaaccaggaaataaacaagctttaactgaacttggaaag
ataaacaaggaattggctttgcaaggagttccaacacaacagacatcttcaacaagcaac
aaaggtcaaagaataatcaaaccaatcgataagccaccccatctgagatctactaaaccc
ctaataagagttgctattgaagaagttggagatacagtgattaatactaagaaggaagca
gctgcagtcagtttcccttttgatgttgcagcgaaaccaccaactatggtatcagcagtc
gaagaaactaataaaattcaggagaaaaacacacctgaggactgttctgtgccaactgtt
gaagcacccaatgccaaaatacttaaagttgaagagagtggacatcatgtcgtatcagac
aagcaacccattacagccaatgctgctactgtagagaaatcagcagaaatgaagaaagtt
gaagtgcctcttttttctcattctgtgattgtccctcaagctcctgccaacgcctttcaa
cttgaagcagacctccgcaaactgaaaaactacccagagatgttatataaatatataaag
caaattgagccctctttgtatacacaactgtttcagaagtctttggaacctgacattcta
aatcacattttaagaatctttcatgattcgtacatcaggtttgaggaaccatccctaatt
ctagatgttctaaggaacttagcaaacgtgaaaaggtttgatatggcggtaatgtttatg
tcggaatcagaaagacaagttgtaaaggacttatttgatcatctacagaaatctggtgtt
gaagaagaatcacttaaaacattgaagagcagatacagtgtttga
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