Rhincodon typus (whale shark): 109931378
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Entry
109931378 CDS
T06055
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04145
Phagosome
rtp04814
Motor proteins
rtp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109931378
09142 Cell motility
04814 Motor proteins
109931378
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109931378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109931378
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109931378
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
109931378
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
109931378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WDR55
Beta-prop_EML
WD40_Prp19
Dynein_IC2
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_IP5PC_F
ANAPC4_WD40
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
109931378
NCBI-ProteinID:
XP_048467087
LinkDB
All DBs
Position
2:complement(72603828..72840670)
Genome browser
AA seq
617 aa
AA seq
DB search
MSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKEAEMQQKKEPPPEDSDLDRKRRETE
ALLQSIGIAPEPALVRTADAGESETTRYSVSFRALQWDTDPSVLQLQSDSDLSRRIPKLV
ISKITQVDFLPREVVSYSKETQTPIAQQPEEDEEDEIPELNLGTESELENQDQKADTKEA
APRELTEEEKQQILHSEEFLIFFDHNIRIIERALAEDSSLFFDYGGKELDEKEGDFQAGL
NLAFNRQFYDEHWSKHRVVTCLDWSLQYPELMVASYNNNEDAPHEPDGVALVWNMKFKKN
TPEYIFHCQSPVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHP
VYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLTQPQENMELVYNKSKPVAVTSMAFPTGD
VNNFVVGSEEGMIYTACRHGSKAGIGEMFEGHQGPVTGINCHMAVGQIDFSHLFVTSSFD
WTVKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNNDTEVPTA
SAAVEGTSALNRVRWASTGREVAVGDSEGHIWVYDVSEQLAIPHGDEWARFARTLVEIRA
NRADAEEESVAELTVQL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataaaagtgatttaaaagccgaactggagcgtaaaaaacaaagactggctcag
atacgagaagagaaaaaaagaaaagaagaagaaagaaagaagaaagaggctgaaatgcaa
cagaagaaagagccacctcctgaggactctgacctggatcgcaagcgaagagagaccgaa
gcattgctacagagcattggcatagccccagaaccagcattagtacgaactgcagatgct
ggtgaatctgagacaacaagatattctgtgtcttttagagcattgcagtgggatactgat
ccttctgtgctccagctgcagtctgactctgacctcagccgccgcataccgaaacttgtg
atttcaaaaattacccaagttgattttttacctcgcgaagtggtgtcatactccaaagag
acccaaacgcccattgctcaacagccagaagaagatgaagaagacgagattcctgaactg
aatctaggaactgaatctgagctggaaaaccaagatcagaaagctgacactaaagaagct
gctcctagagaactcactgaagaggagaagcagcaaattcttcattcagaggaatttttg
attttcttcgaccataacattcgaatcattgaacgtgctcttgctgaagattccagcctc
ttctttgattatggtggcaaggagttggatgaaaaagaaggagacttccaagctgggcta
aaccttgctttcaaccgtcagttttatgatgagcactggtcgaaacacagagttgtaacc
tgtttggattggtcacttcagtatcccgaattgatggttgcttcctataacaacaatgaa
gatgccccacatgagccagatggagtagctttggtttggaacatgaaatttaaaaagaac
acacccgaatatattttccattgtcagtctcctgtaatgtcggtctgctttgcccgattc
cacccaaatttagtagttggtggtacgtactctggacaaatcgttctttgggataaccgc
agccatcgacgaactccagttcaacgtacacctctttctgctgcagctcacacacatcct
gtgtactgtgtgaatgttgttggaacgcaaaatgctcataatctaatcacagtttccaca
gatggaaagatgtgttcctggagcctagatatgctgactcaaccacaggagaatatggag
ctggtttacaataagtcaaagcctgtggctgtcactagcatggctttcccaacgggagat
gtcaataattttgttgtaggaagtgaggagggtatgatttatactgcatgtcggcatggc
agtaaggctggtattggtgaaatgttcgagggtcatcagggtcccgtgactggtatcaac
tgccacatggccgtgggacagattgacttctcacatctgtttgtcacctcttcatttgat
tggactgtcaaattgtggacaacaaagcacaacaagcctctctactcctttgaagacaat
gcagactatgtctacgacgtcatgtggtcaccagtgcatcctgcactatttgcttgtgtg
gatggaatgggacgattagacctctggaacctcaataatgacactgaggtgccaacagct
agtgcagctgttgagggaacatctgcacttaatcgggtcagatgggcatcaactggcagg
gaggtggcagtaggagattcagaagggcacatatgggtttatgatgtcagtgagcaattg
gcaatccctcatggtgatgagtgggcacgttttgctaggaccctggtggagatccgggct
aaccgggcagacgcagaagaggaaagtgttgctgaattgactgtacagctgtaa
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