Rhincodon typus (whale shark): 109931401
Help
Entry
109931401 CDS
T06055
Symbol
tut1
Name
(RefSeq) speckle targeted PIP5K1A-regulated poly(A) polymerase isoform X1
KO
K18709
speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:
2.7.7.19
2.7.7.52
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109931401 (tut1)
Enzymes [BR:
rtp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
109931401 (tut1)
2.7.7.52 RNA uridylyltransferase
109931401 (tut1)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
109931401 (tut1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
zf-met
RRM_PARP14_3
TUTase
RRM_1
RRM_5
zf-C2H2_jaz
RL
zf-C2H2_2
DUF7066
Nup35_RRM_2
NOC3p
Motif
Other DBs
NCBI-GeneID:
109931401
NCBI-ProteinID:
XP_020386280
LinkDB
All DBs
Position
30:complement(19901526..19927393)
Genome browser
AA seq
786 aa
AA seq
DB search
MSESDVEPLVRGGYRCLLCDVRVPNSPSLNDHLKGKKHQKLLSVRSCRKSQQEKSLFVSG
FRKGTSNLEITDYFQNFGTVANVIMDKDKGLYAIIEMADTKEVEKVLSITQHCMNGQKLR
VKHKENKEFKYIPKQKQNPGKKLIDFEELTQALCQAVDVDEQMKQLLQLFELTESETMLR
KLIVSLLQEVFLEFFPSCRILPFGSSVNAFGIHGCDMDLFLDLENTKAFQANARSKVETE
EVNGIKQDTPSETQSEDSILSDIDLGTSTTAEVLELVATVLQKCVPGVHKVQAVTTARLP
VVKFIHKESGLQGDISINNRLAVRNTQFLQLCASLDQRVRPLVYTVRYWAKQKQLAGNPF
GGGPLMNNYAVTLLVVFFLQNRIPPVLPTVNHLKELADEDDQCIIDGWDCTFPSNHSKIE
PSSNSEGLCELLAEFYKFYSQFDFAGTVISLSEGKVHLVTDFIGSESETNLRLGPINIQD
PFELSHNVSGNINERTGQKFKRQLDEAFKYCRSLQYQRKSNKGKIWGIVRLFQPLNSTDC
SPAHSPELDYSSVNELNHGGNVFTIPFKLSCLSEQTREKLHGSSDFREIWFNEVCHAVLY
VMETVLKCSCTCIEGSNVQTDDIKISNFGENRNDNEDNTALKRKHLVEEISETSSTKKAR
IETVQYRREVTWHCAVWSRVWVGRRKMRRQLHFRTSKPDANTDVAINSLEVEEKVTEGIL
QQEECGDKSSPLIMFTLCALLVGGNEDTRAMIRVTPVQHTTLFTEFFHFLESFVPKMTEK
CFEKSD
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtcggacgtggagccgctggtgcgcggtggttatcgctgcttattgtgcgat
gttcgggtccccaatagccccagtttaaatgatcaccttaaaggaaagaaacatcaaaaa
ctgctgagtgtgagaagttgcaggaaatcccagcaggagaagagtttgtttgtaagcggt
ttccgtaaaggcacatctaatctggaaatcactgattactttcagaactttggcacagtg
gcaaatgtgataatggacaaagacaaaggtctatatgccattatagaaatggctgatacg
aaggaggtggaaaaagtgctgtctattacacagcattgtatgaatggtcaaaagttacga
gtgaagcacaaagagaataaggagttcaaatatattccaaaacagaagcagaatcctggg
aaaaaattgattgattttgaagagctgacacaggctctctgtcaggctgttgatgtagat
gaacaaatgaagcagttgctgcagctgtttgagcttacagagagtgaaacaatgcttagg
aagttgattgtgtcacttttgcaggaggtcttcttagaatttttcccaagttgtagaatc
ttgccctttgggtcatcggtgaatgcgtttggtatccatggctgtgacatggatttgttt
ctggatctcgaaaacaccaaggctttccaggcaaatgctagaagcaaagttgaaactgaa
gaggttaatggaattaaacaggatactccgtctgaaactcaatctgaggactcgatcttg
tctgacatagacctgggaacgtcaacaacagctgaggtgcttgaacttgtagcaactgtt
ttgcagaaatgtgttccaggtgtacacaaagttcaggctgtcacgactgccaggctacct
gtggtgaaatttatccataaggaatcaggcttgcaaggagacatttctattaataatagg
ttggctgtacgtaacacacagtttcttcaattatgtgcttcactggatcaaagagtgaga
cctcttgtttatactgttcgctactgggcaaaacaaaagcaactagctggaaatcctttt
ggaggggggccattaatgaataattatgcagtgactctcttggttgtgttcttccttcag
aacaggataccgccagtcctcccaacagtgaaccatttaaaagagcttgcagatgaggat
gaccagtgtataattgatggctgggactgcacttttccaagtaatcattctaaaattgaa
cccagttcaaattctgaaggattatgtgagcttctggcagagttctacaagttttattca
cagtttgactttgctggaactgtaatttcgctgagcgaaggtaaagttcatcttgtgact
gatttcattggttctgagtcagaaacaaatctccgacttggaccaattaatatccaggat
ccgtttgagttgagtcataatgtttctggaaacattaatgaaaggacaggacagaagttt
aaacgacaattagatgaagccttcaagtactgtcgtagcctgcagtatcaaagaaaatca
aacaaagggaagatctggggcatagtcagattgtttcaacctctgaatagtactgactgt
tccccagcacattctccagaattggattatagttcagtcaacgagttgaaccatggtggg
aatgtgtttactattcctttcaaattatcttgcctttcagagcaaacaagggaaaagttg
catggatcttcagatttcagggaaatttggtttaacgaggtgtgtcatgctgtcctgtat
gtgatggagactgttctgaaatgtagttgtacatgtattgaggggagtaatgtgcaaact
gatgatataaagatcagtaactttggtgaaaataggaatgacaatgaagataacactgca
ttgaagagaaaacatcttgtagaagaaatatccgaaacatcaagcacgaagaaagcaaga
attgaaactgtacaataccggagagaagtgacctggcactgtgcagtttggagcagagta
tgggttggacggagaaaaatgagacgtcagctccattttagaacaagtaaacctgatgca
aatacagatgtggcgatcaattccttagaagttgaagaaaaggttactgaaggtatattg
cagcaggaagagtgcggggataaatccagcccattaataatgtttacgctctgtgccttg
ctggttggaggtaatgaagacaccagggcaatgatcagagtcacccccgttcaacacact
actttatttacagaattctttcattttctagagtcgtttgttcccaagatgactgaaaag
tgctttgaaaaatctgactaa
DBGET
integrated database retrieval system
