Rhincodon typus (whale shark): 109931404
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Entry
109931404 CDS
T06055
Name
(RefSeq) beta-1,4 N-acetylgalactosaminyltransferase 2-like
KO
K09655
beta-1,4-N-acetylgalactosaminyltransferase 2 [EC:
2.4.1.165
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00601
Glycosphingolipid biosynthesis - lacto and neolacto series
rtp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
109931404
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtp01003
]
109931404
Enzymes [BR:
rtp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.165 N-acetylneuraminylgalactosylglucosyl-glucoside beta-1,4-N-acetylgalactosaminyltransferase
109931404
Glycosyltransferases [BR:
rtp01003
]
Glycan extension
Sid blood group
109931404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glycos_transf_2
FKRP_N
Glyco_tranf_2_5
Motif
Other DBs
NCBI-GeneID:
109931404
NCBI-ProteinID:
XP_020386289
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All DBs
Position
30:19867442..19889366
Genome browser
AA seq
373 aa
AA seq
DB search
MAQSTVTVPRARDDQVHLQGRLKPPSLKVKLKATQGLFNTIVETSEGMLNGVGKNELTIT
SPSLEIINSILKHVTYTSIKYQIDAADLVYFQFEEHTAVFPIIIRQPPMPRLFDPGPDNS
INSLVTIVTKTFLRYHKLRILISSIRNFYPEITIIIADDSETPEKIEGPHIEQYMMPFAK
GWFAGRNLAASQVTTKYLLWVDEDFLFTEETKLEKLVDVLEKTNLDVVGASVSGSRFQFK
LWYEKGNDDGDCLFSQFGSFHALDGFPHCVVTSLVVNFFLARTQKVWSVGFDPRLSRVAH
PEFFIDGLGSLLVGSCTDVRIGHQKKVKQTQESLKNVERRYATFRHANKRQFKSRLALVH
FKNWLKCYAQYKH
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaatccacagtcactgtgcctagagctagagatgatcaagttcatctgcaagga
cgtctgaagcctccctcactgaaagtcaaactgaaagctacgcaaggactattcaataca
attgttgaaacatctgaaggcatgttaaatggagtaggtaaaaatgaattgactataaca
agcccaagtttggaaatcatcaatagtatactcaaacatgtcacatatacaagcataaag
taccaaattgatgctgctgatttagtatattttcaatttgaagaacatactgctgttttt
ccaatcatcatcagacagcccccaatgccaaggctatttgatcctggaccagacaacagc
atcaactcattggttacgattgtgacaaagacattcttaagatatcataagcttcggatc
ttaatcagtagcatacggaacttttatccagaaataacaataatcattgcggatgacagt
gaaactcctgagaaaattgaaggacctcacatcgaacaatacatgatgccgtttgcaaaa
gggtggtttgctgggagaaacctagcagcttctcaggtcacaacgaaataccttctgtgg
gtggatgaggactttttattcacggaggaaacaaagctagaaaagttggttgatgtgttg
gaaaaaacaaacttggatgtggttggagcctctgtgagtggaagtcgatttcaattcaag
ctgtggtatgagaaaggaaatgatgatggggattgcttgttttcccagtttggcagtttt
catgcactggatgggtttccacattgtgtagttaccagtcttgtggtgaacttctttctg
gccaggacacaaaaggtatggagtgttggatttgacccacgattgtcaagggtagctcac
ccagaatttttcattgatggcctcggtagtttacttgtgggatcatgtactgacgtccgc
attggtcaccagaagaaagtaaaacaaacacaggaatcactgaagaatgttgaaaggaga
tatgcaacttttagacatgcaaataagcgtcaattcaaatctcgtcttgctttggttcac
ttcaaaaattggcttaaatgttacgcccaatacaaacactga
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