Rhincodon typus (whale shark): 109931674
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Entry
109931674 CDS
T06055
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04020
Calcium signaling pathway
rtp04080
Neuroactive ligand-receptor interaction
rtp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109931674
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109931674
04082 Neuroactive ligand signaling
109931674
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109931674
Ion channels [BR:
rtp04040
]
Ligand-gated channels
Glutamate (ionotropic)
109931674
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Fe-ADH
DUF63
Motif
Other DBs
NCBI-GeneID:
109931674
NCBI-ProteinID:
XP_048467077
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All DBs
Position
23:28895975..28994847
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AA seq
1362 aa
AA seq
DB search
MIIVSWHLLLTIILCNILRSTMEQMLQTVLFLSAVDTTFAREPSQPTINVAVVLGGSWYN
MEIRGSFNQETFQDLPVQINTVTVIVNNTNPSSLITHICDVLTKSRIHAVIFEDDIESEA
VAQILDFTSAEVSAPIIGMGGGSTVVLTPKEQHSAFLQLGASMEQQIRVIFKVMEEYNWG
SFAIITSYFPGYQEFITHIQLFIETSYYGWEIEQTLTLEMTKDEDNFKTKRFLQQIDAQI
LILYCSREEAENLFELAEQANLHGPDHIWILSSIAVGNMERVAKQFPVGLISIMTERWKM
SLQQRVRDGVAIIAKGAESFYKTYGYMPGPSADCRHPARGVTRNILYRHMLNISWEGKDF
SFNEDGYLVRPSMAVVTLNRSRFWEMVGRWENGLIRMKYPVWPRYGKFQQPVTDSVHLTV
ATLEERPFVIVEEADPENGACVRNTVPCRKQANLSESIAETYTKLCCKGFCIDILKKLAK
TVKFSYDLYLVTNGKHGKKVRGIWNGMIGEVFYQRADMAIGSLTINEERSEIVSFSVPFV
ETGISVMVARSNGTVSPSAFLEPYSPAVWMMMFVMCLTVVALTVCLFEYFSPVGYNRNLM
NGKITGGPTFTIGKSVWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANL
AAFMIQEQFIDTVSGLSDKKFQKPQDHYPPFRFGTVPNGSTERNIKNNYPDMHSHMTKYN
QRSVADALDSLKSGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKNS
KWKRAIDLALLQFLGDGDTHKLHTVWLTGICQNEKNEAMSSKLDIDNMAGVFYMLLVAMG
LSLLVFAWEHLVYWKLRHHVKKSSKTDFLLAISRGIYSCFSGVQEVSSPLHVAAPIVSSS
FSQANMMKMLQAAKDLVSSTNVESSLENATKTIEHWTRAGENLTNKPPKTPSQQIEGSEA
MNSQQLSVPYISNRHQLCYLPATLSPSLASEREKRWSGQPISKYKSRPESRYITSKPFTV
IHNPHSIPRNEFPMYSQYAKGTDMRKDLESPYVPFISNNELHYQDIYNRKYFTRRLSLPC
RKLASCSAGHVASRSGTKTVPAVKSYIGLNEKWPVRNLRPPASYPNHTNCSSRMRLYSRS
QSEGLPSLARRSSYIKATKEPEEILRFQDRAGNLEKLGLQGEIADLFSSLNNESLEPTRD
TGKQSSDLREAVLGHDKILFSSSPNRPRYSPPARLPSYREACLQNSAALRHASTELLQHS
WLHSCPSPSMYVWHRRTGAQRFNWLFESGHQSCDRGIVMKYLEKRTPPHESPVRQPTAGR
SRIVHHGVTARGNQELEAGREGVSCSHFRKSCARFSSLESEV
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgattatagtttcatggcatcttttattaactattatcctttgcaacattctaaggagc
accatggaacaaatgctacagactgtcctcttcctgtctgcagtagatactacttttgcc
agagagcccagtcaaccaaccatcaatgtcgctgttgtactcggaggatcttggtacaac
atggaaatcagaggcagctttaatcaagagaccttccaggacctgcctgtacaaatcaac
actgtcacagtaatagtgaacaacaccaatcccagcagcctgatcactcacatctgtgat
gtgctgaccaaatccaggatccatgctgttatctttgaggatgatattgaatctgaggct
gtggcacaaattctggattttacctctgcagaagtctcagctccaatcattgggatgggt
ggaggctctactgttgtgctcactccaaaggagcagcattctgcatttctacagttgggt
gcttcaatggaacagcagatcagggtcatcttcaaagttatggaagagtataactggggg
agctttgccatcattactagttacttccctggatatcaggaattcatcacccacattcag
ctttttatcgaaaccagctattatgggtgggaaattgaacagactcttactcttgaaatg
acaaaagatgaggacaatttcaaaacaaagagatttctgcagcagattgatgcacagatt
ctgattctatattgctcgagagaggaggcagaaaatctgtttgaattggctgaacaagct
aatctccatggcccagaccatatctggatactttccagtatcgcagtgggcaacatggaa
cgggtggcaaagcaatttcctgtcggactaatcagcattatgacagagcgatggaagatg
agcttgcagcagcgggtgagagatggagtggcaatcatcgcaaaaggtgcggaaagtttt
tacaaaacatacggatacatgccgggaccaagtgctgactgtaggcatccagctcgaggg
gtcacaagaaatatactatacaggcacatgttgaacattagctgggaaggtaaagacttc
tcttttaatgaggatggctatttggtgagaccatcgatggctgtggtcacactgaacaga
agcagattttgggagatggttggaaggtgggaaaatggcttgataagaatgaaatatcca
gtgtggccaagatatggaaaatttcagcagcctgtaactgacagtgtccatttaactgtt
gccacattggaagagaggccatttgtgattgtggaggaagcagatcctgaaaatggagct
tgtgtacggaatactgtcccttgcaggaagcaagcaaacctgagtgaaagcattgcagag
acatacacaaagttgtgttgtaaaggattctgcatcgacatcctgaagaaactcgcgaaa
actgtcaaattttcctatgacctttacctagtgaccaatggtaaacatggcaagaaggtt
cggggaatctggaatggaatgattggtgaggttttctaccagagagcagacatggctatc
ggatctctcaccatcaatgaggagcgctctgagattgtgagtttctctgtcccctttgtg
gagactggaattagtgtgatggtggccaggagcaatggaaccgtctccccatcagctttt
ctcgaaccttacagccccgcagtgtggatgatgatgtttgtgatgtgtctgacggtggtt
gctctaacagtctgtctatttgagtacttcagtcccgttggatacaaccgaaacctcatg
aatggcaaaattacaggagggccaacatttaccattgggaaatcagtgtggctcctctgg
gcacttgtcttcaacaattctgttccaattgaaaatcccaaaggaacaacaagcaaaatc
atggtcttaatctgggctttttttgctgtcatcttcctggcgagttatacagcaaacttg
gcagcatttatgattcaagagcagtttattgacactgtctcaggtctcagtgacaaaaag
tttcagaagccgcaagatcactatccgccatttcgatttggtactgttcccaatggcagc
acagaacggaatatcaagaacaactatccagatatgcactctcacatgaccaaatataat
caacgttctgtggcagatgctctggacagtttaaaatcagggaagcttgatgcctttatt
tatgatgcagctgttcttaattatatggctgggaaggatgagggctgtaaacttgttact
atcggaagtggcaaagtatttgcaacgactggttatgggatagctctgcagaaaaactcc
aaatggaaaagagccattgacctggccctgttacagttcctgggtgatggagacacacat
aagctgcacactgtgtggttgacaggaatctgtcagaatgaaaagaatgaggcaatgagc
agcaaactggacattgataacatggctggtgtcttctacatgctcctcgtggccatgggc
ctcagtctgctggtcttcgcttgggagcatttagtttattggaagctgaggcatcatgtg
aagaaatccagcaagacagattttcttctggcaatcagcaggggaatctacagttgtttt
agtggtgtacaggaagtctccagcccactccatgtggccgctcccattgtctcctcgagc
ttttctcaagccaacatgatgaagatgttgcaggcagccaaagatttagtctcatccaca
aacgtggaaagttctttggagaatgcaacaaagacaatagaacattggacacgtgcaggt
gaaaacctcacaaacaaacctcctaaaacaccatcacagcagattgaaggatcagaggcc
atgaatagccaacaactttcagttccctatatttctaacagacaccaactttgctacctt
ccagcaacattatctccatctctggcttctgaacgggagaaaagatggtcaggtcaacca
ataagtaaatataagagcagaccagaaagcagatatataacttcaaaaccttttactgta
atccacaaccctcattctataccacgaaatgagttccctatgtactctcaatatgccaag
ggaaccgatatgagaaaagacttggaatccccttatgttccatttatcagcaataatgaa
ttacattatcaggatatttataacagaaaatatttcacaagaagactgtctttgccttgt
aggaaattggccagttgctctgcagggcatgttgcctctcggagtgggacaaagacagta
cctgcagtgaaatcttatattggcttgaacgagaaatggcctgtgcgaaatttgcgccct
ccagcgtcatatcccaaccacaccaattgtagttcgcgtatgagactttattctaggtca
cagtcagaaggactaccctcactagccagacgatcttcatatatcaaggcaacaaaggaa
ccagaggaaatcttgaggtttcaagacagggcaggaaacttggaaaagctgggactgcag
ggagaaattgctgatttgttctccagtctgaacaatgagtccctggaaccaacaagggac
actggcaagcagtcttcagatctaagagaagcggtcctgggtcatgacaagatcttattt
tctagctcaccaaatagacccaggtattctccacctgccagacttccctcatacagagag
gcctgcctgcaaaactcagctgctctgagacatgcctccacggaactactccaacactca
tggttacattcctgtcctagtccctccatgtatgtctggcatcgccgaacgggcgcccaa
cgcttcaactggttgtttgaatcaggacaccaatcctgtgacagaggcattgtgatgaag
tacttagaaaaaaggactccaccccatgaaagtcctgtgaggcagcccacagctggaagg
agcagaatagtgcaccatggggtgacagccagaggaaatcaggagctggaggctggaaga
gaaggagtcagttgctctcatttcagaaaatcctgtgcaaggttttccagtcttgaatct
gaggtatag
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integrated database retrieval system