KEGG   Rhincodon typus (whale shark): 109931674
Entry
109931674         CDS       T06055                                 
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
  KO
K05211  glutamate receptor ionotropic, NMDA 2C
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04020  Calcium signaling pathway
rtp04080  Neuroactive ligand-receptor interaction
rtp04082  Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    109931674
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    109931674
   04082 Neuroactive ligand signaling
    109931674
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rtp04040]
    109931674
Ion channels [BR:rtp04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   109931674
SSDB
Motif
Pfam: Lig_chan Lig_chan-Glu_bd ANF_receptor NMDAR2_C SBP_bac_3 Fe-ADH DUF63
Other DBs
NCBI-GeneID: 109931674
NCBI-ProteinID: XP_048467077
LinkDB
Position
23:28895975..28994847
AA seq 1362 aa
MIIVSWHLLLTIILCNILRSTMEQMLQTVLFLSAVDTTFAREPSQPTINVAVVLGGSWYN
MEIRGSFNQETFQDLPVQINTVTVIVNNTNPSSLITHICDVLTKSRIHAVIFEDDIESEA
VAQILDFTSAEVSAPIIGMGGGSTVVLTPKEQHSAFLQLGASMEQQIRVIFKVMEEYNWG
SFAIITSYFPGYQEFITHIQLFIETSYYGWEIEQTLTLEMTKDEDNFKTKRFLQQIDAQI
LILYCSREEAENLFELAEQANLHGPDHIWILSSIAVGNMERVAKQFPVGLISIMTERWKM
SLQQRVRDGVAIIAKGAESFYKTYGYMPGPSADCRHPARGVTRNILYRHMLNISWEGKDF
SFNEDGYLVRPSMAVVTLNRSRFWEMVGRWENGLIRMKYPVWPRYGKFQQPVTDSVHLTV
ATLEERPFVIVEEADPENGACVRNTVPCRKQANLSESIAETYTKLCCKGFCIDILKKLAK
TVKFSYDLYLVTNGKHGKKVRGIWNGMIGEVFYQRADMAIGSLTINEERSEIVSFSVPFV
ETGISVMVARSNGTVSPSAFLEPYSPAVWMMMFVMCLTVVALTVCLFEYFSPVGYNRNLM
NGKITGGPTFTIGKSVWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANL
AAFMIQEQFIDTVSGLSDKKFQKPQDHYPPFRFGTVPNGSTERNIKNNYPDMHSHMTKYN
QRSVADALDSLKSGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKNS
KWKRAIDLALLQFLGDGDTHKLHTVWLTGICQNEKNEAMSSKLDIDNMAGVFYMLLVAMG
LSLLVFAWEHLVYWKLRHHVKKSSKTDFLLAISRGIYSCFSGVQEVSSPLHVAAPIVSSS
FSQANMMKMLQAAKDLVSSTNVESSLENATKTIEHWTRAGENLTNKPPKTPSQQIEGSEA
MNSQQLSVPYISNRHQLCYLPATLSPSLASEREKRWSGQPISKYKSRPESRYITSKPFTV
IHNPHSIPRNEFPMYSQYAKGTDMRKDLESPYVPFISNNELHYQDIYNRKYFTRRLSLPC
RKLASCSAGHVASRSGTKTVPAVKSYIGLNEKWPVRNLRPPASYPNHTNCSSRMRLYSRS
QSEGLPSLARRSSYIKATKEPEEILRFQDRAGNLEKLGLQGEIADLFSSLNNESLEPTRD
TGKQSSDLREAVLGHDKILFSSSPNRPRYSPPARLPSYREACLQNSAALRHASTELLQHS
WLHSCPSPSMYVWHRRTGAQRFNWLFESGHQSCDRGIVMKYLEKRTPPHESPVRQPTAGR
SRIVHHGVTARGNQELEAGREGVSCSHFRKSCARFSSLESEV
NT seq 4089 nt   +upstreamnt  +downstreamnt
atgattatagtttcatggcatcttttattaactattatcctttgcaacattctaaggagc
accatggaacaaatgctacagactgtcctcttcctgtctgcagtagatactacttttgcc
agagagcccagtcaaccaaccatcaatgtcgctgttgtactcggaggatcttggtacaac
atggaaatcagaggcagctttaatcaagagaccttccaggacctgcctgtacaaatcaac
actgtcacagtaatagtgaacaacaccaatcccagcagcctgatcactcacatctgtgat
gtgctgaccaaatccaggatccatgctgttatctttgaggatgatattgaatctgaggct
gtggcacaaattctggattttacctctgcagaagtctcagctccaatcattgggatgggt
ggaggctctactgttgtgctcactccaaaggagcagcattctgcatttctacagttgggt
gcttcaatggaacagcagatcagggtcatcttcaaagttatggaagagtataactggggg
agctttgccatcattactagttacttccctggatatcaggaattcatcacccacattcag
ctttttatcgaaaccagctattatgggtgggaaattgaacagactcttactcttgaaatg
acaaaagatgaggacaatttcaaaacaaagagatttctgcagcagattgatgcacagatt
ctgattctatattgctcgagagaggaggcagaaaatctgtttgaattggctgaacaagct
aatctccatggcccagaccatatctggatactttccagtatcgcagtgggcaacatggaa
cgggtggcaaagcaatttcctgtcggactaatcagcattatgacagagcgatggaagatg
agcttgcagcagcgggtgagagatggagtggcaatcatcgcaaaaggtgcggaaagtttt
tacaaaacatacggatacatgccgggaccaagtgctgactgtaggcatccagctcgaggg
gtcacaagaaatatactatacaggcacatgttgaacattagctgggaaggtaaagacttc
tcttttaatgaggatggctatttggtgagaccatcgatggctgtggtcacactgaacaga
agcagattttgggagatggttggaaggtgggaaaatggcttgataagaatgaaatatcca
gtgtggccaagatatggaaaatttcagcagcctgtaactgacagtgtccatttaactgtt
gccacattggaagagaggccatttgtgattgtggaggaagcagatcctgaaaatggagct
tgtgtacggaatactgtcccttgcaggaagcaagcaaacctgagtgaaagcattgcagag
acatacacaaagttgtgttgtaaaggattctgcatcgacatcctgaagaaactcgcgaaa
actgtcaaattttcctatgacctttacctagtgaccaatggtaaacatggcaagaaggtt
cggggaatctggaatggaatgattggtgaggttttctaccagagagcagacatggctatc
ggatctctcaccatcaatgaggagcgctctgagattgtgagtttctctgtcccctttgtg
gagactggaattagtgtgatggtggccaggagcaatggaaccgtctccccatcagctttt
ctcgaaccttacagccccgcagtgtggatgatgatgtttgtgatgtgtctgacggtggtt
gctctaacagtctgtctatttgagtacttcagtcccgttggatacaaccgaaacctcatg
aatggcaaaattacaggagggccaacatttaccattgggaaatcagtgtggctcctctgg
gcacttgtcttcaacaattctgttccaattgaaaatcccaaaggaacaacaagcaaaatc
atggtcttaatctgggctttttttgctgtcatcttcctggcgagttatacagcaaacttg
gcagcatttatgattcaagagcagtttattgacactgtctcaggtctcagtgacaaaaag
tttcagaagccgcaagatcactatccgccatttcgatttggtactgttcccaatggcagc
acagaacggaatatcaagaacaactatccagatatgcactctcacatgaccaaatataat
caacgttctgtggcagatgctctggacagtttaaaatcagggaagcttgatgcctttatt
tatgatgcagctgttcttaattatatggctgggaaggatgagggctgtaaacttgttact
atcggaagtggcaaagtatttgcaacgactggttatgggatagctctgcagaaaaactcc
aaatggaaaagagccattgacctggccctgttacagttcctgggtgatggagacacacat
aagctgcacactgtgtggttgacaggaatctgtcagaatgaaaagaatgaggcaatgagc
agcaaactggacattgataacatggctggtgtcttctacatgctcctcgtggccatgggc
ctcagtctgctggtcttcgcttgggagcatttagtttattggaagctgaggcatcatgtg
aagaaatccagcaagacagattttcttctggcaatcagcaggggaatctacagttgtttt
agtggtgtacaggaagtctccagcccactccatgtggccgctcccattgtctcctcgagc
ttttctcaagccaacatgatgaagatgttgcaggcagccaaagatttagtctcatccaca
aacgtggaaagttctttggagaatgcaacaaagacaatagaacattggacacgtgcaggt
gaaaacctcacaaacaaacctcctaaaacaccatcacagcagattgaaggatcagaggcc
atgaatagccaacaactttcagttccctatatttctaacagacaccaactttgctacctt
ccagcaacattatctccatctctggcttctgaacgggagaaaagatggtcaggtcaacca
ataagtaaatataagagcagaccagaaagcagatatataacttcaaaaccttttactgta
atccacaaccctcattctataccacgaaatgagttccctatgtactctcaatatgccaag
ggaaccgatatgagaaaagacttggaatccccttatgttccatttatcagcaataatgaa
ttacattatcaggatatttataacagaaaatatttcacaagaagactgtctttgccttgt
aggaaattggccagttgctctgcagggcatgttgcctctcggagtgggacaaagacagta
cctgcagtgaaatcttatattggcttgaacgagaaatggcctgtgcgaaatttgcgccct
ccagcgtcatatcccaaccacaccaattgtagttcgcgtatgagactttattctaggtca
cagtcagaaggactaccctcactagccagacgatcttcatatatcaaggcaacaaaggaa
ccagaggaaatcttgaggtttcaagacagggcaggaaacttggaaaagctgggactgcag
ggagaaattgctgatttgttctccagtctgaacaatgagtccctggaaccaacaagggac
actggcaagcagtcttcagatctaagagaagcggtcctgggtcatgacaagatcttattt
tctagctcaccaaatagacccaggtattctccacctgccagacttccctcatacagagag
gcctgcctgcaaaactcagctgctctgagacatgcctccacggaactactccaacactca
tggttacattcctgtcctagtccctccatgtatgtctggcatcgccgaacgggcgcccaa
cgcttcaactggttgtttgaatcaggacaccaatcctgtgacagaggcattgtgatgaag
tacttagaaaaaaggactccaccccatgaaagtcctgtgaggcagcccacagctggaagg
agcagaatagtgcaccatggggtgacagccagaggaaatcaggagctggaggctggaaga
gaaggagtcagttgctctcatttcagaaaatcctgtgcaaggttttccagtcttgaatct
gaggtatag

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