Rhincodon typus (whale shark): 109931827
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Entry
109931827 CDS
T06055
Symbol
htra1b
Name
(RefSeq) serine protease HTRA1B
KO
K08784
HtrA serine peptidase 1 [EC:3.4.21.-]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtp01002
]
109931827 (htra1b)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rtp03110
]
109931827 (htra1b)
Peptidases and inhibitors [BR:
rtp01002
]
Serine peptidases
Family S1: chymotrypsin family
109931827 (htra1b)
Chaperones and folding catalysts [BR:
rtp03110
]
Other chaperones and cochaperones
DegP / HtrA
109931827 (htra1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
Trypsin
IGFBP
PDZ_6
Kazal_2
PDZ_2
PDZ
Peptidase_S46
Kazal_1
Peptidase_S32
Kazal_CFAI
GRASP55_65
LSM
Motif
Other DBs
NCBI-GeneID:
109931827
NCBI-ProteinID:
XP_020386684
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All DBs
Position
20:complement(28779096..28819853)
Genome browser
AA seq
468 aa
AA seq
DB search
MLLLLCAVLGSCFLLGDGRITRRSPSCPQFCDVSSCPVLPSDCWSGLVLDACGCCRLCGA
AEGESCNGRGDEVRCGEGLRCSVPPAVNSANRWIKGVCVCDNSEPVCGSDGSTYRNVCEL
KAVSRRAQALNQPPVIFIQRGACGLGQNDPNSLRHKYNFIADVVEKIAPAVVHIELFRRA
TYSNRERSVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELKNGATYNAKIKDIDEKADLA
LIKIDPLGKLPVLLLGRSTDLRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKELGLRNS
DIDYIQTDAIINYGNSGGPLVNLDGEVVGINTLKVTAGISFAIPSDKIRQFLVESYDRQV
KGQVPIKKRYLGVRMMTLTPSFAKELKERQKDFPDVNAGAYIIEVLPRTPASRGGLKDND
VIISINKQLVTSSSDVSEAIKKDPNLSIVVRRSNEDVIINVETEEIEP
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgttgctgtgtgcagtgctggggagctgtttcctgctgggggacggtaggatc
accaggcgctccccgagctgcccccagttctgtgatgtgtctagctgcccggtgctgccc
tctgactgctggtcggggctggtgctggacgcttgcggctgctgccggctgtgcggcgcc
gccgagggcgagtcgtgcaacggccgcggggacgaggtcagatgcggggaagggctgcgc
tgctcggtgccgccggcggtcaactcggccaatcggtggatcaaaggcgtgtgcgtctgt
gacaacagcgagccggtgtgcggcagcgatggcagcacctaccgcaacgtgtgtgagctg
aaggcggtgagccggcgggcacaggcactcaaccaaccgcccgtcatcttcatccagaga
ggagcctgcggactgggtcagaatgacccaaacagtcttcgacataaatataattttatc
gctgacgtggtggagaagattgctcctgccgtggttcatattgaacttttccgcagggca
acttattccaaccgtgaacggtctgttgcgagtggctcaggcttcattgtctctgaagat
ggattgatagtgactaatgcacatgtggttactaacaagcatagagtgaaagtggagtta
aagaatggagccacatacaacgccaaaataaaggatatagatgaaaaagcagatcttgct
ttaattaaaatagaccctctgggtaagttgccagtgctgctgctaggccgctccacagac
ttgagacctggcgagtttgtggtggccattggaagccctttttccctacaaaatacagtg
accacaggaatagtgagcacaactcagcgaggaggaaaggagctgggccttcgaaactcc
gatatcgattacattcagacggatgcgattatcaattatggaaactcaggggggccattg
gtcaatttggatggtgaagttgttggaattaacaccttgaaggtgactgctggaatatca
tttgcaattccatcagacaaaattcgacagtttttggtggaatcgtatgaccgacaagtg
aaaggacaggttccaataaaaaagaggtatctaggagttaggatgatgacacttacccct
agctttgcaaaggaactgaaagagcgccagaaggattttcctgatgttaatgctggagcc
tacatcatcgaggtccttccgcgaacaccagcttccaggggtggcctgaaggacaatgat
gtgattattagtatcaataaacaattggtgacttcatccagtgacgtcagtgaagccatt
aaaaaggatccaaacctgtcaatagtggttcgccgaagcaatgaggatgtgataataaat
gttgagactgaagaaattgaaccttaa
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