Rhincodon typus (whale shark): 109931831
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Entry
109931831 CDS
T06055
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1-like isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109931831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109931831
Membrane trafficking [BR:
rtp04131
]
Exocytosis
Others
Others
109931831
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
109931831
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
RBD-FIP
Rod_CreS
ADIP
GAS
PKcGMP_CC
YfdT_N
Motif
Other DBs
NCBI-GeneID:
109931831
NCBI-ProteinID:
XP_048463969
LinkDB
All DBs
Position
18:19309115..19991307
Genome browser
AA seq
1121 aa
AA seq
DB search
MHGSSRSVGKVEQSNQSPGRSPRLPRSPRLGHRRTNSTGGGSSTSIGGGSGKTLSMENIQ
SLNAAYATSGPMYLSDHDHVGTDSSKATMTLGRASGRSPFGVRMTTMGSSPNIATTSVAS
DSIAFGEQLLPTVSLASTVPHSLRQARDNTIMDLQSQLKEVLRENDVLRKEVDVKESKLS
SSMNSIKTFWSPELKKERALRKDEVAKMTIWKEQFRVVQDENQHLQMTIQALQDELRIQR
DLNQLFQQDNSSRTSEPFIAELTEENFHHLHTEHERQAKELFLLRKTLEEMELRIETQKQ
TLSARDESIKKLLEMLQSKGLSSKVMEEDHERIRRLAEAEMLVNQLENIVEQKEKENNQL
REDIQRRIEVAPESAKTKALQTVIEMKDSKITSLERNIRDLEDEIQMLKSNGALSIEERE
EELKQMEVYRSHSKFMKNKVEQLKEELNSKEFQAEELRKKVTVLQFEVSAIDQVKQELSR
KETDLLALQTKLEMLTNQFSDSQQHVEVLKESLTAKEQRAAILQTEVDALRLRLEEKEST
LNKKSKQMQEMAEEKGILAGEIRDLKDMMEVKERKVNVLQKKIENLQEQLKDKEKQMTSL
KERVKSLQADTTNTDTALTTLEEALAEKEKIIEQLKDQREKDEREKQEEIDSYKEELKEV
KERISGLQGDVSEKEAVLLDLKEHASSLASSGLKKDSKLKALEIALEQKKEECSKLEVQL
RKSFEATTEARASTNLNERIEQLEKVVAQYKDEANKAQAEVDRLLEILKEMESEKNDKDK
RIAELEKQMKEQSKKLANLKHKEQVEKKRNAQLLEEARRREDNLADDSHQLQDSLRQKDD
RIEELEEALRESVQITAEREMVLAQEEAARNNSEKQVQELMAAMEKVKLELELMNAKLSS
TQQSLAEKEAHLSNLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKKTQE
EVASLKREKDRLVQQLKQQTQNRMKLMADNYEEDHLKSSAHSDPMNHKLSPEQIIQSLLE
LNQNRSKLKLYIRHLTSLCQDRDSQILQGLTPPPAYGIDNNRAMWEEELQKMSSEQLNAE
LEQCEKESSELQDYANTILQQIADHCPDILELVVNALEESS
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgcatggaagttctcggtcagtgggtaaagtagagcaaagtaaccagagccctggacgc
tcaccgaggttgccacgatcaccacgtttgggtcaccgtcgaacaaacagcactgggggc
ggttctagtaccagcattggtggtggtagtgggaaaaccctgtctatggagaacatacag
tcgttgaatgctgcatatgctacgtctggccctatgtacctaagtgaccatgaccatgtt
ggtacagattcctctaaagcaacaatgacattgggtagagcttctggacgttcacctttt
ggtgttaggatgaccaccatgggaagtagccctaacattgccactactagtgtggccagt
gatagtatagcttttggagaacagcttttgccaacagtaagcctggcatctactgtacca
cactcattgcggcaagctagggataataccattatggatttgcagtcacagttgaaggag
gtccttcgtgagaacgatgtgcttcgcaaagaggttgatgtaaaagaaagtaagctcagc
tcctcaatgaacagcatcaaaactttctggagtccggagctgaagaaggaacgagcactc
cggaaagatgaggtggctaagatgactatttggaaggaacagtttcgggttgtccaggat
gaaaatcagcaccttcaaatgacaattcaggctttgcaggatgagctccgaattcagcga
gatttgaaccaactctttcagcaggacaatagcagcagaacaagtgagccatttattgct
gagctgacagaggaaaatttccaccaccttcacactgaacatgaacgtcaggccaaagaa
ctattcctattgcgcaagactctggaggagatggagctgcgtattgagacacagaaacaa
acactcagtgcccgtgatgaatctatcaagaaactgctggagatgcttcagagcaaagga
ctgtcctcaaaggtaatggaagaagaccatgagcgaatacgccgactagctgaagcagaa
atgcttgtgaaccagttagaaaacatagttgaacaaaaagaaaaagaaaataatcagctg
agagaggatattcagcggagaattgaagtggctccagaatcagctaagacaaaagcactg
caaactgttattgaaatgaaggatagtaaaatcacatcactggagcggaacattcgagac
cttgaggatgaaatacagatgcttaagtcaaatggagctctgagcattgaggagagagag
gaagagttgaaacagatggaagtttacaggagccattccaagtttatgaagaataaggta
gaacaactgaaagaagagttaaattccaaagaattccaggctgaagagctaagaaagaaa
gtgactgttctccagttcgaggtctctgctattgatcaagtgaaacaggagctttccaga
aaggaaacggacctccttgccttgcagacaaaacttgaaatgctgacaaaccaattttca
gatagccaacaacatgtggaagtgctcaaagagtcgcttacagcaaaggaacagagagct
gccattctgcagacagaggtcgatgcactgcgtctgcggctggaagagaaggagagtaca
ttaaataaaaagtcaaaacagatgcaggaaatggctgaagagaaaggaattttagctgga
gagatccgtgatctgaaggacatgatggaagtcaaagagcgaaaagtcaatgtcttacaa
aagaaaattgagaacctgcaggaacaactaaaggataaagagaagcagatgaccagtctg
aaagaacgtgtaaaatcactgcaggccgacaccaccaatacagatactgccctgactacg
ctagaggaggctcttgcagagaaagagaagataattgagcagcttaaagatcaaagagaa
aaagatgaacgagaaaagcaggaagaaattgatagttacaaagaggagttaaaagaagtt
aaggaacggatcagtggtctccaaggcgatgtctcagagaaggaggctgtgctactggac
ctcaaagaacatgcctcatctttggcatcatctggactgaagaaggattccaagttgaaa
gcactggagatagctcttgaacagaagaaggaggaatgttctaaactagaagtgcaacta
cggaagtctttcgaagctacaacagaagcacgagccagtacaaacctcaatgaacgcatc
gaacaactggagaaggtggtggcacagtataaggatgaagctaacaaagctcaagcagaa
gtggacagactgcttgaaatcttaaaggaaatggaaagcgaaaagaacgataaagataaa
aggatagcagaattggagaaacagatgaaggaacaaagtaagaagttggccaacctgaaa
cacaaagaacaggtggagaagaaaagaaatgcccagttgctggaggaggcacgccgaaga
gaggacaatttagctgatgactcccatcagctccaggattctttacgacaaaaagatgac
cggattgaggaattagaagaggctttaagggagagtgtacagataacagcagaacgtgaa
atggtattagcacaagaagaagctgccagaaacaattctgagaaacaggtgcaagagtta
atggcagctatggagaaagtgaaactagaattggagctgatgaatgccaagctatcctct
acccagcagtccctggcagaaaaggaagcccacctcagtaacctgcgtgctgagaggagg
aaacacctagaggaagtgcttgaaatgaagcaagaagcactgctggcagccatcagtgaa
aaagatgctaacattgctctactggaactctcttcatccaagaagaagaagacacaggag
gaggtagcatcactaaagagggagaaagatagattggtacagcaactcaaacagcagact
cagaacagaatgaaattaatggcagataattatgaggaggaccacctgaaatcctcagcg
cattcagacccgatgaaccataaactctccccggaacagatcatccagtcactattagaa
ctgaaccagaaccgcagtaaactgaagctgtacataagacacctcacatctctgtgtcag
gaccgtgactctcagattcttcaaggattgacaccacccccagcgtatggaattgacaac
aacagggcgatgtgggaggaagagttgcagaagatgagctcagagcagttaaatgctgag
ctggaacagtgtgaaaaagaaagttcagaacttcaagactatgccaacaccatcttacag
cagattgcggaccactgccctgacatccttgaactggtagtcaacgccttagaagaatct
tcgtga
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