Rhincodon typus (whale shark): 109931909
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Entry
109931909 CDS
T06055
Symbol
gata5
Name
(RefSeq) transcription factor GATA-5 isoform X1
KO
K17896
GATA-binding protein 5
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109931909 (gata5)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
109931909 (gata5)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GATA-N
GATA
DUF7573
Zn_Ribbon_TF
ArfGap
Zn_Ribbon_Prim
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-GeneID:
109931909
NCBI-ProteinID:
XP_020386766
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All DBs
Position
19:complement(17195853..17216236)
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AA seq
399 aa
AA seq
DB search
MYQSLTLAANHGQPSYPHEVSGSFMHSPTASPVYVPTTRVPSMLPSIPYLQNCESAHQSH
HLSNPTGWPQPGTDSSAFNPSNPHPSTTFSYSHSPPMSHGAGREAAYSNPLVISASGREQ
YGNALVRSVNGSYSSPYPTYVGPEMTSTWPPGPFESSMIHSLQARQVSMSGRRSSLEMLE
DFPEGRECVNCGSMSTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPQRRLSSSRRAGL
CCTNCHTSTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRKPKNVTKSK
GSSGTASGTNSPSSMSNSENASTIKTESDLASSPYAGQTVVSVSQAPSTAMLSREDLNRG
PSQLKYVPEDYSYTSATAIPQTGVNVPLRQDSWCALALA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaaagtctgacactggcagcgaaccacggacagcccagctatccccatgaggtt
tcgggcagcttcatgcactctccgaccgcctcacctgtgtatgtgccgaccacccgtgtc
ccctccatgctccccagcataccgtacctccaaaactgcgagtcggcccatcagagtcac
catctgagcaacccgaccggctggccgcaaccaggtaccgacagctccgcgttcaacccc
agcaaccctcatccttctaccaccttctcgtattctcacagtccccccatgagtcacggg
gccggcagggaggcggcttacagcaatcccttggtcatcagcgcaagtggccgggaacag
tacggcaatgccctggtcagatccgtcaatggatcttactccagcccgtatcccacctac
gtcggcccagagatgacttcgacctggccacctgggcctttcgagagcagcatgattcac
agtctccaggccaggcaggtctctatgtctgggaggaggtccagtctggagatgttggaa
gatttccccgagggccgggagtgtgtgaattgtgggtccatgtctactccgctctggaga
cgggatgggacaggccattatctgtgcaacgcgtgcggattgtaccacaagatgaacggg
atgaaccgaccgctcattaaaccacaaaggagattgtcatcatctagacgagctggtttg
tgttgcactaactgccacacctctactacaaccctttggagaaggaatgctgaaggggag
ccggtgtgtaatgcttgtggactatacatgaaacttcatggggtaccacgcccactggcc
atgaaaaaagaaagcattcagacaaggaaaagaaaacctaagaatgttaccaaatccaag
ggttcctcagggacagcttcaggaaccaattccccatcttctatgtctaactctgaaaat
gcatcaactatcaaaactgaatctgatctggcctcatctccatatgcaggtcaaacagtt
gtgtctgtttctcaggctccatccacagctatgttaagtcgagaagacttgaaccgtggt
ccttcacaattgaaatatgtaccagaagattattcctatacctcagccactgcaatccca
cagactggagttaatgttccactcagacaagactcttggtgtgctttggcactggcataa
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