Rhincodon typus (whale shark): 109932002
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Entry
109932002 CDS
T06055
Symbol
otpa
Name
(RefSeq) orthopedia homeobox a
KO
K24901
homeobox protein orthopedia
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109932002 (otpa)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
109932002 (otpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
109932002
NCBI-ProteinID:
XP_020386852
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All DBs
Position
3:complement(99664409..99672820)
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AA seq
316 aa
AA seq
DB search
MLSHADLLDARLGMKEAAAELLGHREAVKCRMGPGGSEPGHPGDCPPGSDTVEGATLLPG
DSITSAGSNPGGGGGGGGGSGSGKDPDKQQQQQQQQSQQSQQKQKRHRTRFTPAQLNELE
RSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPTPG
LPQFPGASMGDGLCSFHANDTRWATAGVGVSQLQLPPALGRQQAMAQSLSQCSLGGPPNS
MGLSNSLASANGGGLQSHLYQPTFPGMVPASLAGPGNVTSGSPQLCSSPDSDVWRGTSIA
SLRRKALEHTVSMSFT
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgctctctcacgccgacctcctggacgctcgcctggggatgaaagaggcggcggctgaa
ctgcttgggcaccgggaggcggtgaagtgccggatgggacccgggggctccgagcccggt
cacccgggcgattgccctcccggctcagacacggtggaaggtgcgactctccttcccggg
gacagcatcacctcggccggatcgaacccgggcggaggaggcggaggcggcggcggctca
ggcagcggtaaagacccggacaaacaacagcagcaacaacaacaacagagccaacagagc
caacagaaacaaaagaggcaccggacccgcttcacaccggctcagctcaacgaactagag
aggagcttcgccaagacccactatccggacatcttcatgcgagaggaattggctctgcgc
atcggcctcaccgagtccagagtgcaggtttggtttcagaaccgccgcgccaagtggaag
aagcgtaagaagaccaccaatgtgttccgtgcgccgggcacgctgctgccgactccagga
ctgcctcagttcccaggcgccagcatgggagacggtctgtgctccttccacgccaatgac
acccgctgggccaccgcgggggtgggcgtctcgcagctccagctgcccccggccctgggc
aggcaacaggccatggctcagtccctgtcccagtgcagcctcggcgggccacccaattcc
atggggctctccaacagcctggccagcgccaacggcggaggcttgcagtcccacctgtac
cagcccactttccccggcatggtgcccgcttccctcgccggccccggcaacgtgacgagc
ggctcgccgcagctctgcagctccccagacagcgacgtgtggcgggggacaagcatcgcc
tccctgcgccgcaaagcactcgagcacacagtgtctatgagcttcacctaa
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