Rhincodon typus (whale shark): 109932011
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Entry
109932011 CDS
T06055
Symbol
neu1
Name
(RefSeq) sialidase-1 isoform X1
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00511
Other glycan degradation
rtp00600
Sphingolipid metabolism
rtp01100
Metabolic pathways
rtp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
109932011 (neu1)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
109932011 (neu1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
109932011 (neu1)
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
109932011 (neu1)
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Gene cluster
GFIT
Motif
Pfam:
BNR_2
BNR_3
Tli3
BNR
Motif
Other DBs
NCBI-GeneID:
109932011
NCBI-ProteinID:
XP_048472535
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Position
35:complement(22142482..22173225)
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AA seq
405 aa
AA seq
DB search
MWMRMVPSQPPLCFSGDGLTWKVAGALQYLLLPPGLFLFPLFLLHGTALPVEIKPLVESE
QLLWISGTIGHVDTFRIPLIAVTPHNNLIAVAEARKHSSADIGAKFIAVRTSSDKGETWS
PTTFLDNDGSKIDGLNLGVILVDEEKDLIFIIYTTCAHHYRCNISSTLLIESRDDGRTWS
QPRNLSKMIGTKMFAPGPGSGIQKKYNPKKGRLIACGHGTIEEDGIFCLFSDDHGKTWTN
GGSLKGIPFNQPKKFFDFNPDENQPYELSDGTVVINARNQNFYHCHCRIIVKSYDACESL
PIESVTFDETLIDPAVAAGALVKDDIIFFSNPANPFKRVDLTLRWSYDNGKSWVKDKILI
WHGASGYSSMTTSNNTSNEQYIYLVFEKGMTKITESISFVKIRIN
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtggatgaggatggtcccatcgcagcctcctctgtgcttctccggggacggcttaacg
tggaaagtggctggcgccttgcagtatctgctgctgccgcccggcctcttcctgtttccc
ctgttcctgcttcatgggaccgcactcccggttgagatcaagccgttggttgaaagtgaa
cagttgctgtggataagtggcacaattggccatgttgacacctttaggatcccccttatt
gcagtcaccccccataataacctcatcgctgtggcagaagctagaaagcattcatcagcg
gatattggtgctaagttcattgctgtccgcacgtctagtgataaaggtgaaacctggagc
ccaaccaccttccttgataatgatggttcaaagattgatggcctaaatttgggggtaata
ttggttgatgaagagaaggatctcatttttatcatttacacaacatgtgcccaccactat
cgctgtaacatttccagcacactattaattgagagccgagatgatgggaggacctggagc
caaccaagaaacctgtctaaaatgattggcacgaaaatgtttgcacctggccctggatct
ggcattcagaaaaagtacaatccaaagaaaggtcgtttgatcgcctgtggacatggaaca
attgaggaagatgggatattctgccttttcagtgatgaccatgggaagacctggacgaat
ggagggagtctgaagggaattcccttcaatcagccaaaaaaattctttgacttcaatcct
gatgaaaaccagccctatgaattatcagatggtaccgtggtgattaacgcaaggaatcag
aatttctaccactgtcactgtcgaataatagtgaagagttacgatgcatgcgagtcctta
ccaatagaaagtgtgacctttgacgagactctgatagacccggctgtggctgctggagca
ttagtcaaagacgacattattttcttcagtaatcctgcaaacccattcaaacgtgtagat
cttactcttaggtggagttatgataatggaaagtcgtgggtaaaggacaaaatattgatc
tggcatggcgcaagtggttattcctccatgactacttccaacaacacaagcaatgagcaa
tacatctacttagtttttgagaagggcatgacaaaaataacggaatccatatcgtttgtg
aagattcgcattaactaa
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