Rhincodon typus (whale shark): 109932029
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Entry
109932029 CDS
T06055
Symbol
rbm15b
Name
(RefSeq) putative RNA-binding protein 15B
KO
K13190
RNA-binding protein 15
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109932029 (rbm15b)
03041 Spliceosome [BR:
rtp03041
]
109932029 (rbm15b)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
109932029 (rbm15b)
Spliceosome [BR:
rtp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109932029 (rbm15b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
109932029
NCBI-ProteinID:
XP_020386872
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All DBs
Position
16:55806702..55810415
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AA seq
848 aa
AA seq
DB search
MKRQSERDSSPSSAPGSGRAAKRPRDREREREGRSGREEGDTGRGGGGNYHKAGLSAKHP
GGRSRSRSRDRAAGGGDKSNSNSRREERGDHHHHHHHHETASSARLPTARSSSAQKNKGD
SSRPAGLEYKTLVISNLGSQLTDEAVEDGLFHEFKKFGEVSVNATHTPEGGRLAYVHFRH
HEDAKEARHAKGRLVLYDRPLKIEAVYPKRRSCTPPEVNFGPIHTGYQYRQRSLSPGACS
LRDQRTRHTNYPIEAVPLARERERSLDYYGLYDERGRAYSYPVQEDDLMPEDDKRATRNL
FIGNLDHNVSETDLRRAFEKYGIIEEVVIKRPPRGQGGAYGFLKFQNLDMAHRAKVAMSG
RVIGRNHVKIGYGKANPTTRLWVGGLGPLTSLAALAREFDRFGSIRTIDYVKGDSFAYIQ
YESLDAAQAACAQMRGFPLGGPDRRLRVDFAKVEDTRYQQPYPQAPLPVPFELLADGFGR
HRSLEREARARDRTPPLPLYHERERSYLDGDWSSPAKNLERRNNTDAVSIRNRDRWLNER
ENDRSTVAAKPWEERRKRRSLSNERVRPVLSPYEERVRAKPRGSLELSPDKRNRDARGAD
GTTEKEQVTSGPLEDRRLLVEDKVSSDAQDSVQLKKKDSERNHRTSEIEPEAKASIDAPK
TETKKPANLLEFAQALTLAWNGVLVLKNSCFPTKMFTLEGDAAITHSLLKDSVTGARVSQ
LKIAQRLRLDQPKLDEVTRRIKQGSPNGYAVLLAVQAPQGAEGGDGAVAVEPGLQQRLLR
NLVSYLKQKQAAGVIGLPVGGVKDKDNTGMLYAFPPCVFSQQFLQTAMRTLGKVDEEHLI
VVIVRDSV
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacagagcgagcgcgactcgagccccagctcggctccaggcagcgggagagcg
gccaagaggccccgggaccgggagagagagcgggagggccggtccggcagggaggaaggt
gacaccggccgaggaggaggcggcaactaccacaaggccggcctgagcgccaaacacccg
gggggtcggagcaggagccggagccgggacagagccgcgggagggggggacaaatccaat
agtaacagccgcagggaggaaaggggggaccaccatcaccaccaccaccaccatgagact
gccagctctgccaggttgcccactgccaggtctagctctgcccagaaaaacaaaggtgac
agtagcaggcctgctggcctcgagtacaagaccctggtgatcagcaacctgggctcgcag
ttgacggacgaggcggtggaggatggtctcttccatgagttcaagaagtttggggaggtg
agcgttaatgcaacacacacccctgaagggggccgtctggcatatgtccattttcggcac
cacgaggacgctaaggaagcaaggcatgccaagggccggctggtgctctatgatcgaccc
ctcaaaattgaggcagtgtaccccaagaggaggagttgtactccacccgaggttaacttt
ggacctatccacactgggtatcagtatcggcaacgctctttgtcaccgggggcctgcagc
ctccgagaccagcggacgagacatactaattatcccattgaggcagtgccgctggcaagg
gagagggaacggtcgttagactattacggattatacgacgagcgtgggcgagcttacagc
taccctgtgcaggaggatgatttgatgcctgaggatgacaagcgagccacaaggaatttg
ttcattggcaacttggatcacaatgtttcagagactgatctgagacgtgcttttgagaag
tatggcatcattgaggaagtggtcatcaagcgcccgcccagagggcaagggggtgcctat
gggttcttaaaatttcagaatttggacatggcacaccgagccaaggtagccatgtcaggc
cgggtgattggcaggaaccatgttaaaattggatatggcaaagccaacccaacgactcga
ttatgggtgggtgggctgggacccctgacgtcgctggctgccctcgcccgggagtttgac
cggtttggcagcattcgcaccattgactatgtgaaaggcgacagctttgcttacatacag
tacgagagtttggatgctgcacaggctgcctgtgctcagatgcgtggctttccacttgga
gggcctgaccggcggctgagagtggactttgctaaggtggaagatacacgttaccagcag
ccatacccacaggcaccgcttccagtcccctttgagctgctggcagatggttttggtcgg
caccggagcttggagcgggaggcccgggcacgtgatcggaccccaccactgcccctatat
cacgaacgggagaggagttatttggatggtgactggagcagcccggccaagaatctggag
cgccgcaacaacactgatgctgtttccatccgtaaccgggaccgctggctgaatgagcgg
gagaatgaccgcagtactgttgccgccaagccctgggaagaaaggcggaagcgccggagc
ctttccaatgagcgtgtccgacctgtactctcgccctatgaggagcgggtgagggctaag
cctcggggctcgttggagctgagcccagacaaaaggaaccgtgatgcccgtggggctgat
ggcaccactgaaaaggagcaggtcacctctggccctttggaggatcggcgtctgcttgtt
gaggataaggtgtcctcagatgcccaggactctgtgcagcttaaaaagaaagacagtgag
cgcaatcacagaactagtgagatcgagcctgaggctaaagcgagtattgatgctccaaaa
acagagaccaagaagccagccaatttgctggagtttgcgcaggcactcacacttgcctgg
aatggtgtccttgtgctcaagaacagctgctttcccacaaaaatgttcacacttgagggc
gacgctgccatcacccattccctcctcaaggattctgtaacaggtgcacgggtgtcacag
ctgaagattgctcagcgcctacgtcttgaccagcccaagctggatgaggtgacccgtcgc
atcaagcagggcagccctaatggctatgctgtgctgctcgctgtgcaggctccccagggt
gctgagggaggtgatggggctgtggctgtggagcctggtctccagcagcggctgttacgg
aatttggtgtcatacctgaagcagaagcaggcagcaggagtgattggcttgcccgttggt
ggggtgaaggacaaggacaatacgggcatgctatacgctttcccaccctgtgtcttctct
cagcaattcctgcagacagccatgaggacattggggaaagtggatgaagaacatttaatt
gtggtaatagtaagggactctgtctga
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