Rhincodon typus (whale shark): 109932056
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Entry
109932056 CDS
T06055
Symbol
rangap1b
Name
(RefSeq) ran GTPase-activating protein 1b
KO
K14319
Ran GTPase-activating protein 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109932056 (rangap1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109932056 (rangap1b)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
109932056 (rangap1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_NLRC3
LRR_6
LRR_TMOD-LMOD
LRR_CARMIL
LRR_NLRC4
PRAME_C
Mdm12
DUF832
MCR_beta_N
BUD22
PI3K_1B_p101
Motif
Other DBs
NCBI-GeneID:
109932056
NCBI-ProteinID:
XP_020386892
LinkDB
All DBs
Position
37:complement(5195971..5252000)
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AA seq
584 aa
AA seq
DB search
MASEDISQLVDALAKTQVGGGELSFKGRALKLDTAEAAAEIIEEIERFEHLQALRLEGNT
IGVEAAKAIARSLSNKKELQKCYWSDMFTGRLRSEIPPALISLGDALMSAGAQLTQLDLS
DNAFGPDGVRSIEVLLKSQVCYTLQELRLNNCGMGIGGGQILAAALSECHRLSSALGKPM
ALKVFIAGRNRLENEGAIALADAFKSIGTLEEVHMTQNGINHPGITALAKAFTENQHLRV
INLNDNTFTEKGAVAMAETLKALHNIEVINFGDCLVRSEGALAIAEAVKSGLQNLKELNL
SFGEIRKNAAITVAEAVEHKYLLEKLDLNGNCLGEEGCDQLKEVMDSFNKHDALASLSDD
ESDGDEDEEVDEEEEEDDDDDDLEDEEEDEDEEAEDDGGGEEQEQEKATPVDQLIVDTHV
KTIPITLTSEAANFLSFPSPDKLLKMGPKRSLLLLQQTDLSNAEKVVQTFLKVAAVYKED
QETKAAVFETADELLQKAFKTTGFQLDVFITSLLVYMGLLKSEEKIKTVGNLIGPLTVLR
HVIQKSYFPRSVIPILHAFLTKQNRAFDTCQNAKYTLLETMKNL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgaggatatctctcagctggtggatgcccttgcaaagactcaagtgggtggg
ggagagctgagtttcaaaggccgtgccctaaaacttgacacagctgaagctgctgctgag
attattgaagagattgaaagatttgaacacctgcaggcattacgcctcgaaggaaacaca
atcggtgtagaagctgctaaagctattgccaggagtctatctaataaaaaggaattgcag
aaatgttactggagcgatatgttcaccggacgactacgttcggagatcccacctgctctg
atatctctgggtgatgcactgatgagtgcaggagctcagctgacacaactggatctaagt
gacaatgcatttggaccagatggagttcggagcattgaagtcttattgaagagtcaagtc
tgttacacattacaggagctacgtctgaataactgtggcatgggaatcggtggtgggcag
attcttgctgctgcacttagtgaatgccaccgtctgtcaagtgccctgggaaaaccaatg
gcactgaaagtttttattgctgggaggaatcgtctggagaatgaaggtgccattgcactg
gctgatgcttttaagtccataggaactctggaggaggtacacatgacccaaaatggaata
aaccatccaggtattacggctttggcaaaggcgttcactgaaaaccagcacctgagggtc
ataaaccttaatgataacactttcacagagaaaggagcagttgccatggctgagacgctg
aaggcactccataacatcgaagtaataaattttggggattgtctagtgcggtcagaagga
gctctagctattgctgaagcggtaaaatctggattgcagaatctcaaggaacttaacctt
tcatttggagagatccggaagaatgctgcaatcacggtagctgaagctgtggaacataaa
tacttgctggagaaacttgatctaaacggtaactgtcttggtgaggaaggctgtgaccaa
ttgaaggaagttatggacagcttcaacaagcatgatgcattggcttctctcagtgatgat
gaaagtgatggggatgaggatgaagaggtggacgaggaggaggaggaggatgatgatgac
gacgacctggaggatgaagaggaagatgaagatgaagaagcagaagatgatggaggtgga
gaagaacaggagcaagagaaggcaacaccagttgatcaattgatagttgacacacatgtg
aaaaccatcccaattaccctgacatcagaagctgccaatttcttgtcttttccatctcca
gacaaactccttaaaatgggacctaagcggtcacttctgttactgcagcagactgatctg
tcaaacgcggaaaaggttgtccaaacatttctgaaggtggctgcagtctataaggaagac
caggaaaccaaagcagcagtatttgagactgcagatgaactgttgcagaaagcgttcaag
actacgggatttcaattagatgtgttcattacttctctgttggtgtatatgggacttctg
aagagtgaagagaagattaaaaccgttggtaacctaattgggcctttgacagttctcaga
cacgtgattcagaaaagctactttccacgctctgtgattcccatcctccacgcattcctt
actaaacagaatcgtgcttttgacacctgccaaaatgccaaatacactctgttggagacg
atgaagaatctttaa
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