Rhincodon typus (whale shark): 109932137
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Entry
109932137 CDS
T06055
Symbol
lhx5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109932137 (lhx5)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
109932137 (lhx5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
109932137
NCBI-ProteinID:
XP_020386962
LinkDB
All DBs
Position
24:18623603..18630866
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AA seq
407 aa
AA seq
DB search
MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRFG
TKCAGCCQGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDYLN
TCSLKDTNLNSVSSCTDRSLSPDIQDQNLDDTKETDNSTSSDKETQNNENEEQSMGTKRR
GPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQL
SALGARRHAFFRSPRRMRPLGGRLDESEMMGSAPYNYYGDYQGDYYGPTANYDFFPHGPP
SSQAHSPADSGYMQSSGPGATSLGVLEPPLSAHHPPALGGSENQRYTDMISHPDTPSPEP
GMTGPLHPIPGEVFSGGPSPPFSMSSNSGYSGPLSHPSQELNETAVW
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggtgcactgtgcaggttgtgagaggcctattttagacaggttcctcctaaacgtgctg
gacagagcgtggcacatcaagtgcgtccaatgttgtgaatgcaagtgcaacttgactgaa
aaatgcttttcaagagaagggaagctttactgtaaaaatgatttcttcaggcggttcggt
acgaaatgtgcgggatgttgtcaaggcatctcacccagtgacctcgtaagaaaagcaagg
aataaagtgtttcacttaaactgcttcacttgtatggtttgtaataaacaactgtcaact
ggagaggaactgtatataatcgatgaaaacaaattcgtgtgcaaagaagactatttgaac
acctgcagtttaaaagataccaatttaaattcagtctcttcgtgcaccgatcggagttta
tcgcctgatatccaagatcagaatttagacgatacaaaggaaacggacaactcgacctca
tcagacaaagagacccagaacaacgagaacgaagagcagagtatgggcaccaagcggaga
ggaccccggaccacgattaaagccaagcagttagaaacgttaaaggccgctttcgccgct
accccgaagcccacccgacatatacgggagcagctggctcaagaaacaggcctcaacatg
cgggttattcaggtctggtttcagaacaggaggtccaaggagagaaggatgaagcagttg
agtgctctgggagcacggcggcacgctttcttccgaagtcccaggcgcatgcgtcctctg
ggagggcgcctggacgaatcggaaatgatgggctctgctccctacaattattatggagat
tatcaaggagactactacggcccaactgcaaattatgactttttcccgcatggcccaccg
tcctctcaagcacactcgccggcagattcaggctatatgcagtcctcagggcctggggcg
acttcactcggagttctggaacctccgctatccgcccaccaccctcctgctctcggtggc
agcgaaaaccaaaggtacacggacatgatttcccaccctgacaccccaagccctgagccc
gggatgaccgggccgttgcacccgatcccgggcgaagtgttcagcggaggacccagcccg
cccttctccatgtcaagcaacagcggctacagcgggccgctctcacatccgagtcaggag
ctgaatgagactgcggtctggtga
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