Rhincodon typus (whale shark): 109932164
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Entry
109932164 CDS
T06055
Symbol
hoxb1a
Name
(RefSeq) homeobox protein Hox-B1a
KO
K09301
homeobox protein HoxA/B/D1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109932164 (hoxb1a)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
109932164 (hoxb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
109932164
NCBI-ProteinID:
XP_020386997
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All DBs
Position
30:34928518..34931831
Genome browser
AA seq
311 aa
AA seq
DB search
MDNTRMNSFLEYAICNRGTSAYSSKGYHHSEQGITAFAPCAGNVDNCNGDGRFLVGGNAH
NAFQHQHQSTSSSHHSSLGNPYASSGPNNYTTQTCNSGYNHHYFFNQETDGAYFQNSGYT
ANIASNINQLSDGYCGVSGPGQYQQSYGQEQQGLAYGICANLSPSQEGEKEPLCTSDSSS
SGQTFDWMKVKRNPPKTARIADYGLGGQTNTMRTNFTTKQLTELEKEFHFNKYLTRARRV
EIAATLELNETQVKIWFQNRRMKQKKREKEGFAPHFSVHTAKETGDGSDKSSTTSPSTSP
RSSTSENLQTC
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggacaataccaggatgaactcgttcttagagtacgcaatttgtaatcgtgggacgagc
gcctactcatccaagggttaccaccattcagaacaagggataacagctttcgctccttgt
gcaggtaacgttgacaattgcaatggtgatggacgattcttagtaggaggaaacgcacac
aatgcattccagcatcagcaccagtcaaccagttcctcgcatcattccagtctggggaac
ccatacgccagttcaggccccaacaactacacgacccaaacttgcaactcgggttacaat
catcattactttttcaatcaagaaacggatggggcatattttcaaaactcggggtacact
gccaatatagcatccaatatcaaccagctttcagacggttattgtggtgtctcagggccg
ggtcagtatcagcagtcctacggccaagagcaacagggtttggcgtatgggatttgtgct
aatctgtctccatctcaagagggggagaaggaacctctttgcacctctgattcatcctct
tcgggccagacgtttgactggatgaaagtgaaaagaaatcctcccaaaacagccagaatt
gctgattacgggttaggtggtcagacgaacacaatgcgaaccaatttcaccaccaagcaa
ttgacagaactggagaaagaattccattttaacaagtatctgacccgcgccaggagagtg
gagatagctgcaacgctcgagctgaatgaaacccaagtaaaaatctggttccagaaccgc
aggatgaaacagaagaagcgggagaaagaaggattcgcaccccatttctccgttcacact
gcaaaggagactggagacggttcagacaaatcgtcaactacctctccatccacttcgccc
agatcgtccacatcagaaaatctccagacctgttaa
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