Rhincodon typus (whale shark): 109932196
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Entry
109932196 CDS
T06055
Symbol
gabra5
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04080
Neuroactive ligand-receptor interaction
rtp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109932196 (gabra5)
04082 Neuroactive ligand signaling
109932196 (gabra5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109932196 (gabra5)
Ion channels [BR:
rtp04040
]
Ligand-gated channels
GABA-A
109932196 (gabra5)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
Motif
Other DBs
NCBI-GeneID:
109932196
NCBI-ProteinID:
XP_048453842
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All DBs
Position
6:complement(16517127..16623490)
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AA seq
456 aa
AA seq
DB search
MDSGRLEGFSKLCLLLVSSLTWRPSLSQSVSPALKQHTNDNITIFTRILDGLLDGYDNRL
RPGLGERITEVKTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLKFKGPMQLLSLNNML
ASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVEDGTLLYTMRLTISAECPMQLEDFPMDV
HACPLKFGSYAYPTSEVIYTWTNETHKSVVVAEDGSRLNQYDLLGQTVGSELIPSNTGEY
VIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQMSFWLNRESVPARTVFGVTTVLTMTTLS
ISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKAYEAFQSKK
KEALAKTMNNAYAIGGMTYTPNITKDSVIPSISKSTAVQMRAEERASESKKSYNSVSKID
KMARVVFPVLFGIFNLVYWATYLNRDPVIKVDTAPN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgggaggttggaaggattcagcaagctgtgcttgctccttgtgtcgagcctg
acctggcgcccgagtttgtcccagagcgtctctccagcgctgaagcaacataccaatgat
aatatcaccatctttacccgaatcctggatggtctgctggatgggtacgataacagactg
cggccaggactaggagaaaggatcacggaggttaaaacggatatctacgttacgagtttt
ggcccagtctcagacactgaaatggagtatacgatagacgtattcttccgccaaagctgg
aaggacgagcgcctgaagtttaagggaccgatgcagctactgtctctcaataacatgcta
gcgagtaagatctggacgccagacaccttctttcacaatggcaagaaatcggtagctcac
aacatgaccacccctaacaagttactccggctggtggaggatggtactttgctctatacc
atgaggttaaccatttctgccgagtgtcctatgcaacttgaagattttccaatggatgtt
catgcctgcccccttaaatttggaagctatgcttatccaacctcggaggtcatttacaca
tggacgaacgaaactcacaaatcggtggttgtggcagaagatggatcgcgtctaaatcag
tatgatttattaggtcaaactgtgggcagtgaacttatcccttcaaacacaggcgaatat
gtaataatgacagcacatttccatttgaagagaaaaatcggttattttgtcattcaaacc
tatctcccctgcattatgactgttatcttatcccagatgtcattttggttgaacagagaa
tctgtcccagccagaacagtgtttggtgtaaccacggtgctgacaatgacaacattgagc
attagtgcacggaactctctgccaaaagtagcttacgccactgcgatggactggttcatc
gctgtgtgttacgcatttgtcttttctgctctgattgaatttgcaacagtaaattacttc
accaaacgaagctgggcatgggatgggaaaaaagcatatgaagcttttcaatctaagaaa
aaagaagccttggcaaagactatgaacaatgcttatgcaattggaggaatgacctacacc
cccaacattacgaaggactctgtcatcccaagtatttcaaagagtacggctgtgcaaatg
agggctgaggaaagggcaagtgaaagtaagaagtcttacaacagcgtcagcaagattgac
aaaatggcccgggttgtgtttcctgttctttttggaatatttaatttagtttactgggca
acatatttgaacagagatccggttataaaagtagacactgctccaaattaa
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