Rhincodon typus (whale shark): 109932212
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Entry
109932212 CDS
T06055
Symbol
fgd
Name
(RefSeq) faciogenital dysplasia isoform X1
KO
K05722
FYVE, RhoGEF and PH domain containing 3
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109932212 (fgd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
109932212 (fgd)
Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
109932212 (fgd)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
SOS1_NGEF_PH
FYVE
PH_11
IQ_SEC7_PH
RHG20_PH
FYVE_2
PH_16
Motif
Other DBs
NCBI-GeneID:
109932212
NCBI-ProteinID:
XP_048462491
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All DBs
Position
16:complement(25601420..25814503)
Genome browser
AA seq
901 aa
AA seq
DB search
MQLTRAGKAALCQGLDAGVSPVTEPRLQREAARPGGDTVNGTMREWSRATGTGYSNTQLH
ITGNSETSSSLELRGHLQHLSSIPCIQQPGRKLTNKSRVRKVTTQKPQVPPKPAYLQALC
QEAPFQLIPPAPSRPLPADPKLTKSTCSEAESKETPVLSCVSSLIEKFESVRQLSPEFTK
RNQLILSLKMERSQDSSECAASDSELEPAGDSAEGSTEKTESNETEIGVEVTEHSNEGNV
TMTDSNVKDNDCTSIARTPEARAAAEVGESTLEHNANGKIPNRDSGIDSPSCSGEGEVFP
NEESTEETKNVSSMENGNDLEIKPGDVSELQQKRDSTQEDDDSDMDEGSSEENELAEVPK
IEQSETIKCTEPQKLYNIANELLVTEEAYVKRLHLLDQVFCTKLSEAGIPQDVITGIFSN
ISSIYRFHGQFLLPGLKTRITEEWDKNPRIGDILQKLAPFLKMYGEYVKNFDRAMDLVNS
WTQRSSQFKSIIQDIQKQDVCGNLTLQHHMLEPVQRIPRYELLLKDYLKKLPEDSEDRKD
AEKSLELISTAANHSNVAIRKMEKMHKLLEVYERLGGEADIVNPANELIKEGHIQKLSAK
NGSAQDRYLFLFNNMVLYCVPKLRLMGQKFSVRERIDIAGMQVQEIAKSNVTHTFTIIGK
QRSLELQTRTEEERKDWFQVIQATIEKHKQNSETFNKAFNSSFSRDEEYPPDSPVPGATC
SDSNIGGDFSSPSTLMDSGKRASKTRRDKEKQACKSCSETFNSITKRRHHCKQCNAIICG
KCSEFKPFPDNSRQNRVCKECFALPAPAVPSNPVPENVTEQKRKGIMEDGKNARTIPLPG
YEIELPSSVDTIEKKHSFKLRQSQQIFYFSADDEELQNRWIDIISKTAKGDVEEEASNSV
E
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgaccagagccggaaaagcggcactttgccaaggcttggatgccggagtgagc
ccagtaacggagccccggctccagagggaggcggctcgccccgggggggacacggtgaac
gggaccatgagagagtggagcagagctacaggcaccggttactcaaacactcaactgcac
atcacaggcaattctgagactagctcatctttagagttaagaggtcaccttcagcacctc
agttctataccatgcattcagcaaccaggaagaaagctaaccaacaaatcaagagtcagg
aaagtcactacccagaaacctcaagtacctcctaaacctgcctatcttcaagccttgtgt
caagaagcaccatttcagctgattcctccagctccatcaaggcctttgccagctgaccct
aagctaaccaagagcacctgttcagaggctgagagcaaagaaacaccggtgttgtcttgt
gtctcctcccttattgagaaatttgaaagcgtcaggcagctaagtccagaattcaccaaa
agaaatcagctgattttatccttgaaaatggagcggtctcaggattcctctgagtgtgca
gcatctgacagtgaattagaacctgcaggagattcagctgagggttcaacagaaaaaact
gaatctaatgaaacagaaattggtgtggaagtgacggaacactccaatgagggcaatgtt
acaatgacagacagtaatgtaaaagacaatgactgtacaagcatagccaggactccagag
gcaagagctgcagctgaagttggtgagtctactctggagcacaatgcgaatggcaaaata
cccaacagagacagtggcattgacagtccttcatgtagtggggaaggtgaagttttccct
aatgaagaaagcacagaggaaacgaagaatgtcagttctatggaaaatggaaatgatttg
gagatcaagcctggtgatgtttctgaattacaacaaaagagagattccactcaggaagat
gatgatagtgatatggatgaaggcagcagtgaagaaaatgaactagcagaagtgcctaag
attgaacagtcagaaacaatcaagtgcacagagccacagaagttgtacaatattgcaaat
gagctccttgtcacagaagaggcctatgtgaaaaggcttcaccttctggatcaggtcttt
tgcactaaattaagtgaagctggcattccgcaagatgtgattactgggatattctcaaac
atatcctcaatctatcgctttcatggccaatttctattaccaggattaaagacaagaatt
acagaagaatgggacaaaaaccctcgaataggtgatattctgcaaaagctcgctcctttt
ttaaagatgtatggagaatatgtaaagaattttgaccgagcgatggacctggtgaactcc
tggacacagcgatcatcgcaatttaagtccatcattcaggacattcaaaagcaagacgtt
tgtggtaatctgacattgcaacatcacatgttggaaccagtgcaacgcattccccgttat
gaactacttctgaaggattatttaaagaaactgcctgaggattctgaggataggaaagat
gcagagaaatcattggagcttatttcaacagcagctaaccattccaatgtggcaattcgg
aaaatggaaaaaatgcacaaattattggaggtatatgaaaggcttggaggtgaagcagac
attgttaatcctgccaatgaacttataaaagagggccacatccaaaagctgtcagctaag
aatgggtcagctcaagaccggtacctgtttctgttcaacaatatggttctttactgtgta
ccaaagcttcgactgatggggcagaaattcagtgtgagagaaaggattgacattgctggc
atgcaggtccaagaaattgcgaagtcgaatgtgactcatacatttacaataataggaaaa
caacgctccttagaacttcagaccaggactgaggaagaaaggaaagattggtttcaggtt
atacaggctacaattgaaaagcacaagcagaacagtgaaacattcaacaaggcttttaac
agttcattttcaagagatgaagaatatcctccagattcccccgtgccaggtgcaacttgt
tctgactccaatataggaggagacttttccagcccatctactttgatggattccgggaaa
agagcttcaaagacaagacgtgataaggaaaaacaagcctgcaaaagttgtagcgaaact
tttaattctattactaaacgccgtcatcactgtaaacaatgcaatgcaattatctgtggt
aaatgttcagaattcaagccatttccagataatagtcggcagaaccgtgtgtgtaaggaa
tgctttgcgttgccagctccagcagtcccttcaaatccagtacctgagaatgtaacagag
cagaaaagaaaaggaatcatggaggatggaaaaaatgcccgtactatccccttgcctggc
tatgagattgaacttcctagttccgttgatacgattgagaagaagcattctttcaagctg
agacagtcccaacagatcttttattttagtgcagatgatgaagagcttcaaaatagatgg
attgacataatctcaaaaactgccaagggtgacgttgaagaagaagcaagcaactcagta
gaataa
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